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scnpilot_p_inoc_scaffold_3_302

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 342175..342837

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6U3_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 97.3
  • Coverage: 182.0
  • Bit_score: 361
  • Evalue 6.30e-97
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 182.0
  • Bit_score: 361
  • Evalue 1.80e-97
  • rbh
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT96154.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 182.0
  • Bit_score: 361
  • Evalue 8.80e-97

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 663
GTGGATATTCACGGTCCGCCGCTGCGGTTTCTTCGTGGCAAAAAAATCTCGATAAACTTTAAAGTATTTCCAAAGTCCATCCGTCCGCTCATTTATAATAGCTTAAAAGTCCGTTTGTCGCAGAAAAAGCCAAATATCATCCAAACCGTCGCCTCCTATGGTAAACAGCTGCTCGGGTTCATCCGGCAGCGCGTGAATACCGACGAGGATGCGGAGGATATTTTACAGGACGTTTGGTACCAACTGAGCACCGTGCCGGAGATCGAGGCAATTGAGCAAATGAGCAGCTGGCTGTACCGGGTAGCCCGCAACCGGATCATCGATAAGTACCGCAAACAAAAGCCCGAATCGCTGGAAGATTTTGGCTACGAAGACGAGGATGGCGAGTTCCATTTCAAGGATATCCTGCTTGCCGACGACAATACGCCCGAAACAGCTTATTTGAAAGACCTTTTTTGGGAACAATTGAACATCGCCCTGGACGAACTTCCGGAAAACCAGCGACAAGTTTTTATCTGGAACGAACTGGAAGACCAGACGTTCCAGCAGATTGCCGATCGCACCGGAGAGAATATCAAAACTTTAATTTCCCGCAAACGCTATGCCGTCCGTCATCTTCGTGAGCGGCTCGAAAGCGTGTACCGGGAGTTTGTAAATTATTAA
PROTEIN sequence
Length: 221
VDIHGPPLRFLRGKKISINFKVFPKSIRPLIYNSLKVRLSQKKPNIIQTVASYGKQLLGFIRQRVNTDEDAEDILQDVWYQLSTVPEIEAIEQMSSWLYRVARNRIIDKYRKQKPESLEDFGYEDEDGEFHFKDILLADDNTPETAYLKDLFWEQLNIALDELPENQRQVFIWNELEDQTFQQIADRTGENIKTLISRKRYAVRHLRERLESVYREFVNY*