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scnpilot_p_inoc_scaffold_9_15

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 13688..14596

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUI2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 33.1
  • Coverage: 284.0
  • Bit_score: 153
  • Evalue 4.60e-34
Uncharacterized protein {ECO:0000313|EMBL:ETZ23795.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 300.0
  • Bit_score: 323
  • Evalue 2.80e-85
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 284.0
  • Bit_score: 153
  • Evalue 1.30e-34

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Taxonomy

Pedobacter sp. V48 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 909
ATGTACTTCACTACTCTACCGGACCATTCTCAACCTGGCTTTGATGAAGTGCAGCACTTTGATCAATTCAGAAAGCACAACATTATCTTCAACGCCGAGAGCAAGGAAAGCTATTGTGATGATCATGTTGGTTGTCTTTCCATTAAGACAGTATTGAGCGGCGAGGAAATTTATCGTGTTGATGGCCGGCAACTAGCAGTTCGCCCAGGACAATTCCTGGTTTTAAATAATGATCAGCGCTACGCTTGCCGGATTAGCAGTAGGGAGAGAGTACGATGCTTGTCTGTCTTCTTTAAAAAAGAGTTTGCCTCATCGGTGCTGTTCGATGCGCTGCATGGGGAAGAATTTTTGCTGGATAACCCTTCAGATGATGGAATCATACCTGAATTTTTTCAGACCCTTCGTCAGATAACGACGGATATGGGAGGACATTTTTCTGGACTTGCGAGCTTGCTGGAAACCCGCGGATATGATGAGGCCATGACCGATGAATACCTTGTGTTCTTGTTAAGACACTTGGTGCAGGTACATCGCTCAGACGTAAGGAGCTCCGGCCGGATTAAGGCGGTTAAAGCAGCGACCAGACTGGAAATATATAAACGTCTCTGCATTGCAAGAGATATCTTGCATTCGTCTTGTGGGGCACATATTCAATTAAGCGAGATTGGTGCCCAGGCCGGTATGTCAGTTCCGCAACTGGTCAGGCAGTTCAAATCTGCTTTTCAAACGACGCCTTACCAGTACTTTGTCGGCATCCGGTTGAAGCAGGCAGCCCATTTACTGCAACATACAGGCGAGCCGGTGCAGGACATTGCGTATATGTGCGGATTCGAGGATGCCGGCGCTTTCAGCAGGGCGTTCAGGTCGGTCTACGGTATGCAGCCAACGCGATTCAGGGCCGGCAGGTAA
PROTEIN sequence
Length: 303
MYFTTLPDHSQPGFDEVQHFDQFRKHNIIFNAESKESYCDDHVGCLSIKTVLSGEEIYRVDGRQLAVRPGQFLVLNNDQRYACRISSRERVRCLSVFFKKEFASSVLFDALHGEEFLLDNPSDDGIIPEFFQTLRQITTDMGGHFSGLASLLETRGYDEAMTDEYLVFLLRHLVQVHRSDVRSSGRIKAVKAATRLEIYKRLCIARDILHSSCGAHIQLSEIGAQAGMSVPQLVRQFKSAFQTTPYQYFVGIRLKQAAHLLQHTGEPVQDIAYMCGFEDAGAFSRAFRSVYGMQPTRFRAGR*