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scnpilot_p_inoc_scaffold_9

Search features with annotation key words

Displaying items 1-30 of 523 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_9_1
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..1722)
DNA (1722bp) protein (574aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" so
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ1_9BACT rbh
ATP-binding domain-containing protein
scnpilot_p_inoc_scaffold_9_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1722..2471)
DNA (750bp) protein (250aa)
Putative response regulatory protein ypdB n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ2_9BACT rbh
Putative response regulatory protein ypdB {ECO:0000313|EMBL:CCH54217.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BU
LytTR family two component transcriptional regulator
scnpilot_p_inoc_scaffold_9_3
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2602..3447
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6F7_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG99710.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_9_4
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3478..4095
DNA (618bp) protein (206aa)
Cupin 2, barrel n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K6F6_9BACT rbh
cupin 2, barrel rbh
Cupin 2, barrel {ECO:0000313|EMBL:CCG99709.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_9_5
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4111..4725
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GJZ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH54219.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_9_6
unknown

Not on your lists

4722..5057
DNA (336bp) protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5857..6507
DNA (651bp) protein (217aa)
Transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VU12_DYAFD
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACT94780.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_9_8
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6860..7072
DNA (213bp) protein (71aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DVN4_THIND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD04081.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_p_inoc_scaffold_9_9
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7779..8285
DNA (507bp) protein (169aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVC6_DYAFD
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT96656.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
scnpilot_p_inoc_scaffold_9_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8290..8931
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVC7_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96657.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_9_11
unknown

Not on your lists

comp(8928..9161)
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_12
unknown

Not on your lists

comp(9192..9365)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_9_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10145..12472)
DNA (2328bp) protein (776aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036B5CE2 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK05708.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
hypothetical protein
scnpilot_p_inoc_scaffold_9_14
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12547..13317)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037B8867 rbh
LuxR family transcriptional regulator Tax=GWA2_Bacteroidetes_31_9_curated
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_9_15
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13688..14596
DNA (909bp) protein (303aa)
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUI2_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ23795.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_9_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15414..16328
DNA (915bp) protein (305aa)
Esterase/lipase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2H9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ23796.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_9_17
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16438..17439)
DNA (1002bp) protein (334aa)
NADPH:quinone oxidoreductase n=1 Tax=Pedobacter agri RepID=UPI00029A4096 rbh
Alcohol dehydrogenase zinc-binding domain protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Zn-dependent oxidoreductase
scnpilot_p_inoc_scaffold_9_18
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17523..18293)
DNA (771bp) protein (257aa)
short-chain dehydrogenase n=1 Tax=Pedobacter agri RepID=UPI000299FE25 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KFC20283.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas
teichoic and lipoteichoic acid D-alanine esterification
scnpilot_p_inoc_scaffold_9_19
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18360..19094)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MTU6_9SPHI rbh
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAE83524.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
short-chain dehydrogenase/reductase SDR rbh
scnpilot_p_inoc_scaffold_9_20
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19195..19779)
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K623_9BACT
Transcriptional regulator {ECO:0000313|EMBL:KIC62736.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacteriu
transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_9_21
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20204..20809
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YFU6_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57180.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_9_22
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21055..25218
DNA (4164bp) protein (1388aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037522B1 rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:AHM59137.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source=
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_9_23
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25500..28640
DNA (3141bp) protein (1047aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000381E9E2 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KJF43955.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_9_24
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28727..30310
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036123EB rbh
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KJF43954.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibact
RagB/SusD domain-containing protein rbh
scnpilot_p_inoc_scaffold_9_25
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30321..31511
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035C7933 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJF43953.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_9_26
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

31539..34418
DNA (2880bp) protein (960aa)
Type 3a cellulose-binding domain protein n=1 Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PXX7_9FIRM rbh
type 3a cellulose-binding domain-containing protein
Type 3a cellulose-binding domain protein {ECO:0000313|EMBL:AEM74844.1}; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedi
scnpilot_p_inoc_scaffold_9_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34719..35930)
DNA (1212bp) protein (404aa)
Cobalamin synthesis protein P47K n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VYS9_DYAFD rbh
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ACT93434.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (s
scnpilot_p_inoc_scaffold_9_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

36151..37590
DNA (1440bp) protein (480aa)
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W189_DYAFD rbh
multi-copper enzyme maturation ABC transporter permease-like protein
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein {ECO:0000313|EMBL:ACT91946.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cy
scnpilot_p_inoc_scaffold_9_29
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

37587..38978
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W188_DYAFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT91945.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_9_30
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38971..39666
DNA (696bp) protein (232aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W187_DYAFD rbh
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACT91944.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
Displaying items 1-30 of 523 in total

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