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scnpilot_p_inoc_scaffold_282_11

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 10561..11643

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4A9_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 359.0
  • Bit_score: 292
  • Evalue 5.80e-76
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 359.0
  • Bit_score: 292
  • Evalue 1.60e-76
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADY50866.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 359.0
  • Bit_score: 292
  • Evalue 8.20e-76

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGCGGGTTTCCTCTTTTTTAGTTCTACTTTGTTTGGCGGCTCTATTCTTTTCTTGCAGTTCAATTGAACAGTCGGGTGAAGATGATTTGGGATTTGGCTCCGGCGACCAGGTTGAGGATACTACAGTAGTCAAGATTGGTAGTGTACTTATTGGAGGGTTTGAATCGGAGATTATTTGCAACGGGCGTTTGAGCGCAAATAAGCAAGCCGTCCTTCGATTCAGGATAAGTGAGCAAATTCAAGAAATCAGAATAGTTGGCGGTGAGCATGTTGATAAAGGACAGGTTTTGGCTGTGCTGCGAGGAGACGAGCTCGAAAATCAAAGTCGCCGGTCCCGTTTGGTGTTGGAAAAGGCGACTGTGGATTTAGATGATCGACTGATTGATTATGGTTACCGAATTGCCGATACACTTCGTGTGCCGAGGTCGATATTGCGAATGGCAAAAATAAAAAGTGGATATCTCACGGCGCAATTCGATTACGACGAGGTCCAGCAGAATTTGGGGAAAACTAAGGTGACTGCGCCATTCGCCGGTACGGTAGCTAATTTGAGCAAATCTGCTCACAATGATGCGCAGGTTAACGATGAGCTCTGCACGCTGCTGGATGAAAGCGAAATGCGTGTAGAATTTACTTTATTGGAAGGTGAGTTGGACAAGTTCTCGCCGGGCACGGTCATCGAGGTAGTCGCGGCAAATGGAGTTGTAGTTGAGGGTTCAGTAACTCACATAAACCCTGTTGTTGAGAAGTCGGGGCTTGTCAGGGGATACGGCATCATAAAAAATGTTCGCGGCAGGCTTCTTTCCGGAATGAACGTCGAGGTTATAGTTAAAAGGCAAATGAAAGATAAAATGTATGTCCCGAAAGCAGCTGTCGTGAGACGGGACAATCGGTCGGTGGTGTTCACTTTCGATAGTGGCCGGGCAAAATGGAACTATGTCGAGACCGGAAATGAAAATCGGGGCTACATATGTATCGAATCGGGCTTAAATGGGGATCAGAAAGTAATTGTTTCTAATAATCTTACCCTTGCGCACGACTCGTTTGTAAAGATTGATTCACGGCCAATCGAGCAACTTTGA
PROTEIN sequence
Length: 361
MRVSSFLVLLCLAALFFSCSSIEQSGEDDLGFGSGDQVEDTTVVKIGSVLIGGFESEIICNGRLSANKQAVLRFRISEQIQEIRIVGGEHVDKGQVLAVLRGDELENQSRRSRLVLEKATVDLDDRLIDYGYRIADTLRVPRSILRMAKIKSGYLTAQFDYDEVQQNLGKTKVTAPFAGTVANLSKSAHNDAQVNDELCTLLDESEMRVEFTLLEGELDKFSPGTVIEVVAANGVVVEGSVTHINPVVEKSGLVRGYGIIKNVRGRLLSGMNVEVIVKRQMKDKMYVPKAAVVRRDNRSVVFTFDSGRAKWNYVETGNENRGYICIESGLNGDQKVIVSNNLTLAHDSFVKIDSRPIEQL*