ggKbase home page

scnpilot_p_inoc_scaffold_282

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_282_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3..395)
-----------------
DNA (393bp)
protein (131aa)
tyrosine recombinase n=1 Tax=Dyadobacter beijingensis RepID=UPI000382B302
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT96417.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain AT
scnpilot_p_inoc_scaffold_282_2
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1096..1434)
-----------------
DNA (339bp)
protein (113aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thaue
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363D091
scnpilot_p_inoc_scaffold_282_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2488..3579
-----------------
DNA (1092bp)
protein (364aa)
Uncharacterized protein {ECO:0000313|EMBL:EIY41500.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08
scnpilot_p_inoc_scaffold_282_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3579..4844
-----------------
DNA (1266bp)
protein (422aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZWX6_9PORP
Putative glycosyltransferase {ECO:0000313|EMBL:GAO41951.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_282_5
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4863..5696
-----------------
DNA (834bp)
protein (278aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IP82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23710.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
KDEL motif-containing protein 1-like
scnpilot_p_inoc_scaffold_282_6
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5700..7592
-----------------
DNA (1893bp)
protein (631aa)
Glycosyl transferase, family 2 n=1 Tax=Pedobacter sp. BAL39 RepID=A6E9I6_9SPHI rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:EDM37817.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
glycosyl transferase family protein
scnpilot_p_inoc_scaffold_282_7
Acinetobacter sp. NIPH 758, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7598..8227
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. NIPH 758 RepID=N8V1A8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENU93606.1}; TaxID=1217712 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
scnpilot_p_inoc_scaffold_282_8
unknown

Not on your lists

8332..8640
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_282_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8728..9945
-----------------
DNA (1218bp)
protein (406aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO41954.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
scnpilot_p_inoc_scaffold_282_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9938..10537
-----------------
DNA (600bp)
protein (200aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO41953.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
scnpilot_p_inoc_scaffold_282_11
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10561..11643
-----------------
DNA (1083bp)
protein (361aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4A9_PEDSD
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADY50866.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;"
scnpilot_p_inoc_scaffold_282_12
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11694..14783
-----------------
DNA (3090bp)
protein (1030aa)
Acriflavin resistance protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4B0_PEDSD rbh
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ADY50867.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseud
scnpilot_p_inoc_scaffold_282_13
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14792..17863
-----------------
DNA (3072bp)
protein (1024aa)
Acriflavin resistance protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4B1_PEDSD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ24017.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
acriflavin resistance protein
scnpilot_p_inoc_scaffold_282_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17858..19306)
-----------------
DNA (1449bp)
protein (483aa)
Outer membrane efflux protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4B7_PEDSD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ24018.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
outer membrane efflux protein
scnpilot_p_inoc_scaffold_282_15
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19397..19654)
-----------------
DNA (258bp)
protein (86aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2U2_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ28271.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginib
scnpilot_p_inoc_scaffold_282_16
Chlorobium phaeovibrioides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(19899..20729)
-----------------
DNA (831bp)
protein (277aa)
Integrase, catalytic region n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SCC8_PROVI rbh
integrase catalytic subunit
Integrase, catalytic region {ECO:0000313|EMBL:ABP36137.1}; TaxID=290318 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Prosthe
scnpilot_p_inoc_scaffold_282_17
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20750..21016)
-----------------
DNA (267bp)
protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MT64_9SPHI
transposase
Transposase {ECO:0000313|EMBL:AIM36897.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. M
scnpilot_p_inoc_scaffold_282_18
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21180..21716
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036526CC
Uncharacterized protein {ECO:0000313|EMBL:GAL85484.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
scnpilot_p_inoc_scaffold_282_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21777..23090
-----------------
DNA (1314bp)
protein (438aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3A1_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92205.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_282_20
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24430..25017
-----------------
DNA (588bp)
protein (196aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BS27_9FLAO
cAMP-binding protein
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EHQ03553.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source
scnpilot_p_inoc_scaffold_282_21
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25371..29069
-----------------
DNA (3699bp)
protein (1233aa)
Fibronectin type III domain-containing protein (Fragment) n=1 Tax=Flavobacterium sp. CF136 RepID=J2S281_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF16539.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
hypothetical protein
scnpilot_p_inoc_scaffold_282_22
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29101..32409
-----------------
DNA (3309bp)
protein (1103aa)
RHS repeat-associated core domain protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTS1_SOLCM
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFD06646.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; So
scnpilot_p_inoc_scaffold_282_23
unknown

Not on your lists

32414..32749
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_282_24
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32835..34685
-----------------
DNA (1851bp)
protein (617aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRL5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH56543.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_282_25
unknown

Not on your lists

34628..35311
-----------------
DNA (684bp)
protein (228aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_282_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

35375..38692
-----------------
DNA (3318bp)
protein (1106aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000365F80D rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95742.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_282_27
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39279..40622)
-----------------
DNA (1344bp)
protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chry
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K7X9_9BACT
scnpilot_p_inoc_scaffold_282_28
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40619..41302)
-----------------
DNA (684bp)
protein (228aa)
Transcriptional regulatory protein cusR n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K7Y0_9BACT
Transcriptional regulator {ECO:0000313|EMBL:KFF02555.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacteriu
ompR; Transcriptional regulatory protein cusR
scnpilot_p_inoc_scaffold_282_29
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41333..42034)
-----------------
DNA (702bp)
protein (234aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K7Y1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFF02556.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_p_inoc_scaffold_282_30
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42125..42508)
-----------------
DNA (384bp)
protein (128aa)
MFS transporter n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B6509B
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:BAL76220.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="
Displaying items 1-30 of 82 in total

View Taxonomy