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scnpilot_p_inoc_scaffold_1227_17

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 20373..20645

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C133_SPHS2 similarity UNIREF
DB: UNIREF100
  • Identity: 40.4
  • Coverage: 89.0
  • Bit_score: 72
  • Evalue 3.10e-10
Contig102, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75379.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 76.0
  • Bit_score: 89
  • Evalue 3.40e-15
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 89.0
  • Bit_score: 72
  • Evalue 8.70e-11

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 273
ATGAGCAATGAGAATAAAGAAGAGCCCGGAACACCTGAACTAGATGCCATAAAAGAGCGTAAAAAAATTGGCAGAAAATTAAGAATATTGAGGAAAAAACTTGGGTATTCTAGTCCCGATAGTTTTACGTATGACAAAGGGTTTAATAGATCTCAATATGGTAAGTATGAGGCTGGTTCTGAGGATTTTAGATTTAGTACATTGATTAACTTGCTAAATTTGCATGGCTTAAAGCTAAGTGAGTTTTTTGATGAAAGTTTTGAAGAAAGCTGA
PROTEIN sequence
Length: 91
MSNENKEEPGTPELDAIKERKKIGRKLRILRKKLGYSSPDSFTYDKGFNRSQYGKYEAGSEDFRFSTLINLLNLHGLKLSEFFDESFEES*