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scnpilot_p_inoc_scaffold_1227

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1227_1
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(207..1136)
DNA (930bp) protein (310aa)
DNA primase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BJP2_ZUNPS
DNA primase
DNA primase {ECO:0000313|EMBL:ADF53740.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM
scnpilot_p_inoc_scaffold_1227_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1391..1651
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YI26_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFF17773.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
hypothetical protein
scnpilot_p_inoc_scaffold_1227_3
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1654..1995
DNA (342bp) protein (114aa)
Putative uncharacterized protein id=2182817 bin=GWE2_Bacteroidetes_32_14 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
Putative uncharacterized protein Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_p_inoc_scaffold_1227_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2115..2669)
DNA (555bp) protein (185aa)
Antirestriction ArdA family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W334_DYAFD
Antirestriction ArdA family protein
Antirestriction ArdA family protein {ECO:0000313|EMBL:ACT92138.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans
scnpilot_p_inoc_scaffold_1227_5
unknown

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comp(3112..4239)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037DFF6C
scnpilot_p_inoc_scaffold_1227_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4501..7590
DNA (3090bp) protein (1030aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003741380 rbh
lantibiotic dehydratase
Lantibiotic dehydratase domain protein {ECO:0000313|EMBL:ACU58933.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
scnpilot_p_inoc_scaffold_1227_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7729..8508
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000382CC2E
LytTR family transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ADB40688.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spiros
scnpilot_p_inoc_scaffold_1227_8
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8521..9678
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003821B91
signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEE52877.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" s
scnpilot_p_inoc_scaffold_1227_9
unknown

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9772..9924
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1227_10
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10356..11552
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CA0D0
Uncharacterized protein {ECO:0000313|EMBL:KIA82437.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_1227_11
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11574..12143
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003788B73
cAMP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EJP94928.1}; TaxID=718224 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD142.;"
scnpilot_p_inoc_scaffold_1227_12
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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12410..13066
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP6_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ18110.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
scnpilot_p_inoc_scaffold_1227_13
unknown

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13193..13474
DNA (282bp) protein (94aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1227_14
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13536..15053)
DNA (1518bp) protein (506aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FYD3_ECHVK
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AGA77645.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" s
scnpilot_p_inoc_scaffold_1227_15
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15083..16480)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D2781 rbh
RagB/SusD family protein
RagB/SusD family protein {ECO:0000313|EMBL:AGA77646.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strai
scnpilot_p_inoc_scaffold_1227_16
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16486..19785)
DNA (3300bp) protein (1100aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000380B475 rbh
TonB-dependent receptor {ECO:0000313|EMBL:EHQ30944.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginib
SusC/RagA family TonB-linked outer membrane protein
scnpilot_p_inoc_scaffold_1227_17
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20373..20645
DNA (273bp) protein (91aa)
Helix-turn-helix domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C133_SPHS2
Contig102, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75379.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_1227_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21358..21852
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037D6416
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1227_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21957..22331
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EE1E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92187.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_1227_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22331..22684
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W384_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92188.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_1227_21
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22668..24677
DNA (2010bp) protein (670aa)
Bacteroides conjugative transposon TraG-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE11_FLAJ1
Conjugal transfer protein TraG {ECO:0000313|EMBL:KFF13748.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
Type IV secretory pathway VirB4 components-like protein
Displaying 21 items

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