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scnpilot_p_inoc_scaffold_596

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_596_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168..692)
DNA (525bp) protein (175aa)
Phosphoribosyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4D0_ACIDE
Phosphoribosyltransferase {ECO:0000313|EMBL:EER60689.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafield
phosphoribosyltransferase
scnpilot_p_inoc_scaffold_596_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(746..2131)
DNA (1386bp) protein (462aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00
Adenylosuccinate synthetase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=PURA_ACIET
scnpilot_p_inoc_scaffold_596_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2169..3317)
DNA (1149bp) protein (383aa)
UPI0003A13687 related cluster n=1 Tax=unknown RepID=UPI0003A13687
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
histidyl-tRNA synthetase 2
scnpilot_p_inoc_scaffold_596_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3379..3564)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP68_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK91008.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp.
hypothetical protein
scnpilot_p_inoc_scaffold_596_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3577..4476)
DNA (900bp) protein (300aa)
Protein HflC n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFY4_ACIET
hflc protein
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
scnpilot_p_inoc_scaffold_596_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4486..5550)
DNA (1065bp) protein (355aa)
UPI0003D3D624 related cluster n=1 Tax=unknown RepID=UPI0003D3D624
Membrane protease subunits, stomatin/prohibitin homologs {ECO:0000313|EMBL:GAD24220.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax
hflk protein
scnpilot_p_inoc_scaffold_596_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5941..7062)
DNA (1122bp) protein (374aa)
GTP-binding proten HflX n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365BB13
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamon
GTP-binding proten HflX
scnpilot_p_inoc_scaffold_596_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7163..7411)
DNA (249bp) protein (83aa)
RNA-binding protein Hfq n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D6890
RNA chaperone Hfq
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_596_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7501..8844)
DNA (1344bp) protein (448aa)
UPI0003A91DC1 related cluster n=1 Tax=unknown RepID=UPI0003A91DC1
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobact
engA; GTP-binding protein enga
scnpilot_p_inoc_scaffold_596_10
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8856..9995)
DNA (1140bp) protein (380aa)
Outer membrane protein assembly factor BamB n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2Y6_ACIAP
outer membrane assembly lipoprotein YfgL
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
scnpilot_p_inoc_scaffold_596_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9992..10651)
DNA (660bp) protein (220aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003807CED
Uncharacterized protein {ECO:0000313|EMBL:GAD24225.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_596_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10667..11956)
DNA (1290bp) protein (430aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXJ4_ALIDB
scnpilot_p_inoc_scaffold_596_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12040..13317)
DNA (1278bp) protein (426aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hyd
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXJ5_ALIDB
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
scnpilot_p_inoc_scaffold_596_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13318..14253)
DNA (936bp) protein (312aa)
UPI0003A6C2AD related cluster n=1 Tax=unknown RepID=UPI0003A6C2AD
Uncharacterized protein {ECO:0000313|EMBL:GAD24228.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
scnpilot_p_inoc_scaffold_596_15
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14246..15073)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C2596 rbh
Type IV pilus biogenesis/stability protein PilW {ECO:0000313|EMBL:GAD24229.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
type IV pilus biogenesis/stability protein pilw
scnpilot_p_inoc_scaffold_596_16
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15103..16215)
DNA (1113bp) protein (371aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=2 Tax=Acidovorax RepID=RLMN_ACISJ
radical SAM protein
scnpilot_p_inoc_scaffold_596_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16271..16696)
DNA (426bp) protein (142aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=NDK_ACISJ
scnpilot_p_inoc_scaffold_596_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16774..18003)
DNA (1230bp) protein (410aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK0_ALIDB
pseudouridine synthase Rsu
scnpilot_p_inoc_scaffold_596_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17996..18619)
DNA (624bp) protein (208aa)
Chromosome segregation and condensation protein, ScpB n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4B1_ACIDE
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
segregation and condensation protein B
scnpilot_p_inoc_scaffold_596_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18788..19777)
DNA (990bp) protein (330aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
Pseudouridine synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEK2_ALIDK
pseudouridine synthase
scnpilot_p_inoc_scaffold_596_21
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19777..20625)
DNA (849bp) protein (283aa)
Peptidase M23B n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W569_ACISJ
peptidase M23B
Peptidase M23B {ECO:0000313|EMBL:ABM41394.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
scnpilot_p_inoc_scaffold_596_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20666..21451)
DNA (786bp) protein (262aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:ADV00772.1}; EC=2.1.1.77 {ECO:0000313|EMBL:ADV00772.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
Protein-L-isoaspartate O-methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TXK4_ALIDB
scnpilot_p_inoc_scaffold_596_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21448..22221)
DNA (774bp) protein (258aa)
surE; stationary phase survival protein SurE (EC:3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
surE; stationary phase survival protein SurE (EC:3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] id=12552302 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
stationary-phase survival protein SurE
scnpilot_p_inoc_scaffold_596_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22351..23331
DNA (981bp) protein (327aa)
NADPH2:quinone reductase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2X9B8_DELAC
NADPH2:quinone reductase {ECO:0000313|EMBL:EPD46740.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
alcohol dehydrogenase
scnpilot_p_inoc_scaffold_596_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23383..24906
DNA (1524bp) protein (508aa)
diguanylate cyclase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BF437
Diguanylate cyclase {ECO:0000313|EMBL:GAD24239.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diguanylate cyclase
scnpilot_p_inoc_scaffold_596_26
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25030..25470)
DNA (441bp) protein (147aa)
Putative signal transduction protein with CBS domains n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MC55_ACIET
signal transduction protein with cbs domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACM33760.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
scnpilot_p_inoc_scaffold_596_27
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25785..26390
DNA (606bp) protein (202aa)
Glutathione S-transferase domain-containing protein id=1279022 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
gst; glutathione S-transferase
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_p_inoc_scaffold_596_28
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26464..27702)
DNA (1239bp) protein (413aa)
Arabinose efflux permease family protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EKF9_9BURK
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJE52766.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
transporter
scnpilot_p_inoc_scaffold_596_29
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27723..28487)
DNA (765bp) protein (255aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0K9N3_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJE50310.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF31
IclR family transcriptional regulator
scnpilot_p_inoc_scaffold_596_30
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28585..29424
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ED43_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE50311.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Ac
short chain dehydrogenase
Displaying items 1-30 of 57 in total

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