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scnpilot_p_inoc_scaffold_38

Search features with annotation key words

Displaying items 31-60 of 413 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_38_31
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33161..34867)
DNA (1707bp) protein (569aa)
Putative type II secretion system protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MEB4_BORPB rbh
Type II/IV secretion system protein {ECO:0000313|EMBL:KCV63161.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetell
type II secretion system protein
scnpilot_p_inoc_scaffold_38_32
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34854..36296)
DNA (1443bp) protein (481aa)
Putative type II secretion system protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MP29_BORBM rbh
General secretion pathway protein A family protein {ECO:0000313|EMBL:KDD62290.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" so
type II secretion system protein
scnpilot_p_inoc_scaffold_38_33
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36293..37243)
DNA (951bp) protein (317aa)
Putative membrane protein n=4 Tax=Bordetella bronchiseptica RepID=Q7WPA2_BORBR
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCN21556.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchis
scnpilot_p_inoc_scaffold_38_34
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37240..38994)
DNA (1755bp) protein (585aa)
Putative type II secretion system protein n=3 Tax=Bordetella bronchiseptica RepID=K0MRV5_BORBM rbh
type II secretion system protein rbh
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:KDD62295.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
scnpilot_p_inoc_scaffold_38_35
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39049..39837)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003678A67
hypothetical protein Tax=GWE1_Burkholderiales_65_30_curated
hypothetical protein
scnpilot_p_inoc_scaffold_38_36
unknown

Not on your lists

comp(39839..40441)
DNA (603bp) protein (201aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_38_37
unknown

Not on your lists

comp(40438..40956)
DNA (519bp) protein (173aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_38_38
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40953..42353)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MSQ2_BORBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCN21561.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchisep
scnpilot_p_inoc_scaffold_38_39
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42350..42889)
DNA (540bp) protein (180aa)
Putative exported protein n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TW70_BORBO
Putative exported protein {ECO:0000313|EMBL:CCN21562.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchis
hypothetical protein
scnpilot_p_inoc_scaffold_38_40
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42894..43718)
DNA (825bp) protein (275aa)
Putative type II secretion system protein n=7 Tax=Bordetella RepID=K0MDK9_BORPB rbh
type II secretion system protein
Putative type II secretion system protein {ECO:0000313|EMBL:CCJ48076.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor
scnpilot_p_inoc_scaffold_38_41
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43991..45694
DNA (1704bp) protein (568aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L5P9_STEMA rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:EQM87332.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas mal
scnpilot_p_inoc_scaffold_38_42
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45728..47302)
DNA (1575bp) protein (525aa)
Choline/carnitine/betaine transporter n=2 Tax=Stenotrophomonas maltophilia RepID=G0K1Z4_STEMA rbh
choline/carnitine/betaine transporter
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:AEM52676.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotro
scnpilot_p_inoc_scaffold_38_43
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47752..49629
DNA (1878bp) protein (626aa)
Phosphomethylpyrimidine synthase {ECO:0000255|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000255|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00089}; Short
Phosphomethylpyrimidine synthase n=2 Tax=Stenotrophomonas maltophilia RepID=J7SYG9_STEMA rbh
thiC; thiamine biosynthesis protein ThiC
scnpilot_p_inoc_scaffold_38_44
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50128..52455
DNA (2328bp) protein (776aa)
transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFC7E6 rbh
TolB protein {ECO:0000313|EMBL:EZP44718.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RI
cadC; transcriptional activator cadC
scnpilot_p_inoc_scaffold_38_45
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52568..53473
DNA (906bp) protein (302aa)
AraC family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F20B8A rbh
Transcriptional regulator {ECO:0000313|EMBL:EED38811.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotropho
hth transcriptional regulator
scnpilot_p_inoc_scaffold_38_46
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53520..56360
DNA (2841bp) protein (947aa)
TonB-dependent receptor n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KSI0_STEMA rbh
TonB-dependent receptor {ECO:0000313|EMBL:CCH14022.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
TonB-dependent receptor
scnpilot_p_inoc_scaffold_38_47
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56615..57820)
DNA (1206bp) protein (402aa)
chemotaxis protein CheY n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EFBAEF rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KCX00961.1}; TaxID=69929 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboric
two-component system response regulator rbh
scnpilot_p_inoc_scaffold_38_48
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57890..58426)
DNA (537bp) protein (179aa)
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1183154 species="Ba
Inorganic pyrophosphatase n=9 Tax=Stenotrophomonas RepID=B2FT63_STRMK rbh
scnpilot_p_inoc_scaffold_38_49
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58692..60737)
DNA (2046bp) protein (682aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
pyrophosphate-energized proton pump (EC:3.6.1.1)
pyrophosphatase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031C3CFA rbh
scnpilot_p_inoc_scaffold_38_50
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60981..61502
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UBR2_XANAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBA15284.1}; TaxID=380358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albili
scnpilot_p_inoc_scaffold_38_51
unknown

Not on your lists

comp(61543..61668)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_38_52
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61770..63026)
DNA (1257bp) protein (419aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|
6-phosphofructokinase n=1 Tax=Xanthomonas sacchari RepID=UPI0002630625 rbh
scnpilot_p_inoc_scaffold_38_53
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63176..63739
DNA (564bp) protein (188aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031BFBF2 rbh
adenylate kinase
scnpilot_p_inoc_scaffold_38_54
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64038..65399
DNA (1362bp) protein (454aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F12624 rbh
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:AHY57828.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomo
mpl; UDP-N-acetylmuramate--L-alanine ligase
scnpilot_p_inoc_scaffold_38_55
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65488..66096
DNA (609bp) protein (203aa)
ATP-dependent protease n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A7597A rbh
ATP-dependent protease {ECO:0000313|EMBL:AHY57829.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomon
hypothetical protein
scnpilot_p_inoc_scaffold_38_56
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66140..68143)
DNA (2004bp) protein (668aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037CDB82 rbh
Membrane protein {ECO:0000313|EMBL:AHY57830.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
transmembrane DedA family protein
scnpilot_p_inoc_scaffold_38_57
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68274..68945
DNA (672bp) protein (224aa)
serine/threonine protein kinase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031612AA rbh
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AJC47270.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas
scnpilot_p_inoc_scaffold_38_58
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69188..69877)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FCBB09
Uncharacterized protein {ECO:0000313|EMBL:EZP44691.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
hypothetical protein
scnpilot_p_inoc_scaffold_38_59
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70016..70834
DNA (819bp) protein (273aa)
Short chain dehydrogenase n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5THV1_STEMA rbh
Short chain dehydrogenase {ECO:0000313|EMBL:EMI48732.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas mal
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_38_60
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70888..71763)
DNA (876bp) protein (292aa)
ion transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003093DD6 rbh
Potassium voltage-gated channel subfamily A member 2 {ECO:0000313|EMBL:EZP44687.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotropho
Ion transport protein
Displaying items 31-60 of 413 in total

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