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scnpilot_p_inoc_scaffold_38_34

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(37240..38994)

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=3 Tax=Bordetella bronchiseptica RepID=K0MRV5_BORBM similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 560.0
  • Bit_score: 578
  • Evalue 6.60e-162
  • rbh
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 560.0
  • Bit_score: 578
  • Evalue 1.90e-162
  • rbh
Pilus (MSHA type) biogenesis protein MshL {ECO:0000313|EMBL:KDD62295.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bor similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 559.0
  • Bit_score: 578
  • Evalue 9.30e-162

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1755
ATGAATCCCAACGCCCGCACCGCCCGCGTCCCACGCCGCCCCACGGTCAGAACGCTCGTCAGCGCGATCGGCGCGTTGGCGCTGACCGCCTGCAGCAACATGCCGCCACGCAGCGTCCAGGAACTCCCGCCGACCGAGTACAAGGCGCTCGAACGCAGCGGCAACGCCATCGTCGAGGAATCCAGGAAGCTCGCCAGCCAGCAGGACCGCATGCGCGAACAGGTCGAGCAGCGCCTGCAGCAGCAGGCAGACGCCGTCGCGCCGGTGGCGCCGGCCTACGACCCGCTGGAAAACACCGTGGTCAGCATCAGCATGTTCAACGCCGACGTCGGCCAGCTGCTGTGGGCGCTGGCCGACGAGCTGAAGATGAACCTGATCGTCGACCCGCAGGTGCTGGAGCAGCGCCAGCGCACCAGCCTGCACCTGCGCAACGTCAGCGCACGCGAGGTCTACAACCACATCCTCGACGCGTTCGACCTGCACGGCGAGATCCGCGGCGGCGCGCTGGTGGTGGGGCAGATGCGCGAACGCATCTTCAACGTCGACCTGCTCAACTCCAGCACCTCCTTCGACCTGTCCACCGGCGGCGACGTGTTCGGTGCCGGCATCCAGAGTGCCGGCGGCGGCGGCCAGTCGCTGCGCGGCACGCTCACCATGAGCGGCAGCGTCGGCAAGGACAACGACCCCTACAAGCAGCTGGACGCCGCGATCAAGGTGATCCTGGGCAGCGACGAACAGGCCACCACCGCGCGTGGCCCGGATGCGCCGCCGGCGCCGGAAAAGAGCCGCTACAGCCTGGATCCCAGCTCCGGCACGCTGTTCGTCCGCGCCCGCCCGTCGCAGATCCGCGCGGTGGAGGAGCTGGTCGGCCACACCACCAGCAAGATGCGCCGCCAGGTCCTGGTCGAAGCGCAGATCCTGGACGTGTCGCTCAACGACAACTTCCAGTACGGCGTGGACTGGAACCTGCTGCGCAACCGCGTGGCCGGCATCTACGGCGACAGCCCGGCCACCATCGCGCCGCTGCCCGGCACGCCCGCCAATCCCGACCTCGGCATCCCGGAAAACCCCAACCTGCTGCCCTACCAGCGCTATGGCCGCTATGGCGACCAGGCCCGCAACATCATCTTCCCCAACCAGACGCTGGGCTCGGTGGCCGGGCGCGGGCTGGGCATCAGCTACCTGACGGACACCTTCTCGGCCGCGCTCAACGCGCTGCGCACCTTCGGCAACGTCAAGGTGCTGTCCAACCCCAGCGTGCGCGTGCGCAACGGCAGCCCGGCCTACCTGAGCGTGGGCTCCAACATCCGCTACGTCACCAAGTCCACCAGCAACTTCTCCAACACCGGCGGCGGCAGCGCCTACAACCAGTCCACCGACATCCAGACCGATTCGCTGTTCTCCGGCGTGGTGATCGGCGTGGCCCCGGTCGTGCACGACAACGGCGGCGTCGAACTGCTGGTGCACCCGATGCAGACCGAAGTGGTCCCCGGCAGCCTGGAACTGCAGAAGTTCCCCAACGGCAACGCCGTCACCCTGCCGGTGGTCAACGTCAAGGGCATCACCACCACGCTCAACCTGCGCGATGGCGACACCGTGCTGCTCGGCGGCCTGATCGACCAGAAGGCCAACCTCAACGACAGCGGCATCCCCGGCCTGTCCGACGTGCCGGCCTTCGGCAAGCTGTTCGGCTCGCGCGCCAAGCAGCAGAGCACCCGCGAACTGGTGCTGGTGCTGCGGGTGAAGGTGATATGA
PROTEIN sequence
Length: 585
MNPNARTARVPRRPTVRTLVSAIGALALTACSNMPPRSVQELPPTEYKALERSGNAIVEESRKLASQQDRMREQVEQRLQQQADAVAPVAPAYDPLENTVVSISMFNADVGQLLWALADELKMNLIVDPQVLEQRQRTSLHLRNVSAREVYNHILDAFDLHGEIRGGALVVGQMRERIFNVDLLNSSTSFDLSTGGDVFGAGIQSAGGGGQSLRGTLTMSGSVGKDNDPYKQLDAAIKVILGSDEQATTARGPDAPPAPEKSRYSLDPSSGTLFVRARPSQIRAVEELVGHTTSKMRRQVLVEAQILDVSLNDNFQYGVDWNLLRNRVAGIYGDSPATIAPLPGTPANPDLGIPENPNLLPYQRYGRYGDQARNIIFPNQTLGSVAGRGLGISYLTDTFSAALNALRTFGNVKVLSNPSVRVRNGSPAYLSVGSNIRYVTKSTSNFSNTGGGSAYNQSTDIQTDSLFSGVVIGVAPVVHDNGGVELLVHPMQTEVVPGSLELQKFPNGNAVTLPVVNVKGITTTLNLRDGDTVLLGGLIDQKANLNDSGIPGLSDVPAFGKLFGSRAKQQSTRELVLVLRVKVI*