ggKbase home page

scnpilot_p_inoc_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 256 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_84_1
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..759)
DNA (759bp) protein (253aa)
Putative RHS family protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FI25_STRMK
Uncharacterized protein {ECO:0000313|EMBL:AKC88056.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
RHS family protein
scnpilot_p_inoc_scaffold_84_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1250..2209)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7Z7Z2_9XANT
Wall-associated protein {ECO:0000313|EMBL:KGQ19779.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdone
wall-associated protein
scnpilot_p_inoc_scaffold_84_3
unknown

Not on your lists

comp(4337..4765)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_84_4
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4887..5576)
DNA (690bp) protein (230aa)
Glutathione S-transferase {ECO:0000313|EMBL:EZP44465.1}; EC=2.5.1.18 {ECO:0000313|EMBL:EZP44465.1};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
gst6; glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KU13_STEMA rbh
scnpilot_p_inoc_scaffold_84_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5684..6265
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036E1C91 rbh
UPF0114 protein C405_18130 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomona
hypothetical protein
scnpilot_p_inoc_scaffold_84_6
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6467..7462
DNA (996bp) protein (332aa)
cell envelope biogenesis protein TonB n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000313ED2D rbh
Energy transducer TonB {ECO:0000313|EMBL:AHY57215.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomon
TonB dependent receptor protein
scnpilot_p_inoc_scaffold_84_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7567..8760)
DNA (1194bp) protein (398aa)
ABC-type Na+ efflux pump, permease component n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G403_STEMA rbh
ABC transmembrane permease transport system protein
Putative ABC transmembrane permease component transport system protein {ECO:0000313|EMBL:CAQ47868.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
scnpilot_p_inoc_scaffold_84_8
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8757..9512)
DNA (756bp) protein (252aa)
ABC-type Na+ transport system, ATPase component n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BIK9_9XANT rbh
ABC-type Na {ECO:0000313|EMBL:KGQ18402.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;
natA; Na+ extrusion ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_84_9
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9544..11076)
DNA (1533bp) protein (511aa)
TAP domain-containing protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USY2_PSEUP rbh
TAP domain-containing protein {ECO:0000313|EMBL:KGQ18401.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter d
TAP domain-containing protein
scnpilot_p_inoc_scaffold_84_10
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11143..11340)
DNA (198bp) protein (66aa)
Cro/Cl family transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FCF196
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KGM53148.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Ly
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_84_11
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11351..11932)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WXF6_PSEUU
Uncharacterized protein {ECO:0000313|EMBL:AKC86727.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
hypothetical protein
scnpilot_p_inoc_scaffold_84_12
unknown

Not on your lists

comp(11936..12100)
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_84_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12249..13430)
DNA (1182bp) protein (394aa)
diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D7D304 rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACF53574.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophili
scnpilot_p_inoc_scaffold_84_14
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13514..14224)
DNA (711bp) protein (237aa)
phenol hydroxylase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035E873B rbh
Phenol hydroxylase {ECO:0000313|EMBL:AHY57206.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas r
phenol hydroxylase
scnpilot_p_inoc_scaffold_84_15
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14363..15316
DNA (954bp) protein (318aa)
ABC transporter ATP-binding protein n=2 Tax=Stenotrophomonas RepID=B8L7G2_9GAMM rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EED37810.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="S
ABC transporter-like protein
scnpilot_p_inoc_scaffold_84_16
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15313..16107
DNA (795bp) protein (265aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000311D098 rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudox
ABC transporter permease
scnpilot_p_inoc_scaffold_84_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16149..17087
DNA (939bp) protein (313aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xant
apbA; 2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003091AE6 rbh
scnpilot_p_inoc_scaffold_84_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17084..17986
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SYD5_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP78872.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
nucleoside-diphosphate-sugar epimerases
scnpilot_p_inoc_scaffold_84_19
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18099..19598
DNA (1500bp) protein (500aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L274_9GAMM rbh
OmpA/MotB domain protein {ECO:0000313|EMBL:EED38136.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
flagellar motor protein MotB
scnpilot_p_inoc_scaffold_84_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19648..20463)
DNA (816bp) protein (272aa)
Deoxyribonuclease TatD n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FE18_STEMA rbh
Preprotein translocase subunit TatD {ECO:0000313|EMBL:AHY57201.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="S
TatD-related deoxyribonuclease
scnpilot_p_inoc_scaffold_84_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20541..23042
DNA (2502bp) protein (834aa)
RNA helicase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FA7A0E rbh
RNA helicase {ECO:0000313|EMBL:AHY57199.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizoph
ATP-dependent helicase HrpB rbh
scnpilot_p_inoc_scaffold_84_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23195..23548
DNA (354bp) protein (118aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003609FC2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF53586.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltop
scnpilot_p_inoc_scaffold_84_23
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23589..24131)
DNA (543bp) protein (181aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
ribosomal large subunit pseudouridine synthase E n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037DA075 rbh
pseudouridine synthase
scnpilot_p_inoc_scaffold_84_24
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24299..25168)
DNA (870bp) protein (290aa)
methyltransferase n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036FC4C1 rbh
Methyltransferase {ECO:0000313|EMBL:AKC86737.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas
methyltransferase rbh
scnpilot_p_inoc_scaffold_84_25
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25324..26280
DNA (957bp) protein (319aa)
NADP-dependent aryl-alcohol dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002ED4E65 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:AHY57195.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomona
oxidoreductase
scnpilot_p_inoc_scaffold_84_26
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26644..27372)
DNA (729bp) protein (243aa)
alpha/beta hydrolase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B23CA rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase {ECO:0000313|EMBL:EQM80238.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophi
scnpilot_p_inoc_scaffold_84_27
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27398..30112)
DNA (2715bp) protein (905aa)
GCN5 family N-acetyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031CAD3C rbh
GCN5 family acetyltransferase {ECO:0000313|EMBL:AHY57186.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr
acetyl-CoA synthetase subunits alpha and beta
scnpilot_p_inoc_scaffold_84_28
Maricaulis maris, Maricaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30210..30581)
DNA (372bp) protein (124aa)
Transcriptional regulator, XRE family n=1 Tax=Maricaulis maris (strain MCS10) RepID=Q0APA7_MARMM
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABI65880.1}; TaxID=394221 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Maricaulis.;" source="Marica
scnpilot_p_inoc_scaffold_84_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30693..32063)
DNA (1371bp) protein (457aa)
Magnesium transporter n=2 Tax=Stenotrophomonas maltophilia RepID=J7VKB3_STEMA rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas
magnesium transporter
scnpilot_p_inoc_scaffold_84_30
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32394..34226
DNA (1833bp) protein (611aa)
Glutathione-regulated potassium-efflux system protein KefB n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5D528_STEMA rbh
Glutathione-regulated potassium-efflux system protein KefB {ECO:0000313|EMBL:CCP13769.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Steno
glutathione-regulated cation-efflux system (K(+)/H(+)antiporter)
Displaying items 1-30 of 256 in total

View Taxonomy