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scnpilot_p_inoc_scaffold_24_415

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 448872..449849

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037B2400 similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 325.0
  • Bit_score: 371
  • Evalue 6.80e-100
  • rbh
Putative transmembrane sensor {ECO:0000313|EMBL:EZP46023.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenot similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 323.0
  • Bit_score: 377
  • Evalue 1.70e-101
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 318.0
  • Bit_score: 363
  • Evalue 9.00e-98

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Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGACCGGGCGCGATACACCGCCCCGCGACGCGCTGTTCGCCCGCGCCGCAGCCTGGGTGGCACGGCTGGACGCCGCCGACTGCACCCGCGCCGAACGCGCGGCCTTCGAGGAATGGCTGGCCGCCGACCCGGCGCGGGTGCGCGCCTGGGCCGAGGCCGAACGGCTGCACGCGTGCGCCGCGACGCTGCGCGATGACCCCTGGCTGCGCGCCGGCGCCCGCCACGTGGTCCGGCGGCCCCTGTACCGGCGGCCCCTGTTCGGGATGGCCGCGGCCGCCGCGCTGTGCCTGGCGGTGGGAACCGGCTGGGTACTGGCCACCGATGGCAACCCCACCCCGCATACCTACGTCAACAGCGGCTTCGCGCCCCAACGCCAACTGCTCGAGGACGGCAGCGTCGTGGTACTCGACGCCCGCACCACCCTGACCGCGCGGTTCGGCTGGCGCCGGCGCGGCATCGAACTGCAGCAGGGCCGGATGCAACTGCAGGTGGCGCCGTCGCCGCGGGCGATGCGGGTGCAGGCAGGCAACAGCGTGCTGCGCGATATCGGCACCACCTTCCAGGTCGAACTGCTGGATGACGGGCGCATCGACATCGCCCTGCTCGACGGCGCCCTGGAAATCGACAGCCGCGGCACGCAGGGCATGCACGCCGCCCTGCAGCCGGGACAACAACTGCAGGTGCTGCCGTCGGGCCGCATCGAGCCGGCCCACCCGCTTCCGCAGCCGCAGGCCGAGGCCTGGCCACAGGGACGGCTGCTGTTCGACGCCACGCCGTTGCCGGTGGTGATCGCCAGGATGAACCGCTACACCGCCACGCCGCTGGCCATCGGCGATCCGGCGCTGGCGCCGCTGGCCGTGAGCGGCACGTTCGCCGCCGGCGACCAGGCTGCGCTGCTGTCCGCGCTGGAACTGGGCTGGTCGGTCACCGCACGCGCGCGCGCCGACGGTACGCTCGAGCTGCGCGGCGTGCGCTGA
PROTEIN sequence
Length: 326
MTGRDTPPRDALFARAAAWVARLDAADCTRAERAAFEEWLAADPARVRAWAEAERLHACAATLRDDPWLRAGARHVVRRPLYRRPLFGMAAAAALCLAVGTGWVLATDGNPTPHTYVNSGFAPQRQLLEDGSVVVLDARTTLTARFGWRRRGIELQQGRMQLQVAPSPRAMRVQAGNSVLRDIGTTFQVELLDDGRIDIALLDGALEIDSRGTQGMHAALQPGQQLQVLPSGRIEPAHPLPQPQAEAWPQGRLLFDATPLPVVIARMNRYTATPLAIGDPALAPLAVSGTFAAGDQAALLSALELGWSVTARARADGTLELRGVR*