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scnpilot_p_inoc_scaffold_160_232

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(233902..234777)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000366D051 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 291.0
  • Bit_score: 540
  • Evalue 7.60e-151
  • rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 291.0
  • Bit_score: 540
  • Evalue 1.80e-150
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 291.0
  • Bit_score: 539
  • Evalue 4.80e-151

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGCCAGAACACCTCCACTGTCCTTGTGGCGAACAATCTTCCGATTCCCAGTGCGCTGGGTTCGCTGGATGCCTACATCGGTGCCGTGCACCAGATCCCGGTGCTCTCGGTCGATGAGGAACAGGAACTGGCGCGCCGCTTCCGCGACGAGCAGGACCTGGATGCCGCGCGCGAGCTGGTGCATTCGCACCTGCGTTTCGTCGTGCACGTGGCCCGCGGCTACAACGGCTACGGCCTGCAGCTGGGCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCAAGCGCTTCGACCCGGACATGGGCGTGCGCCTGGTCTCCTTCGCGGTGCACTGGATCCGTGCCGAGATGCACGAGTTCATCCTCAAGAACTGGCGCATCGTCAAGGTCGCCACGACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCAAGTCCAAGACCCGACTGGGCTGGATGAACGCCGCCGAGGTCAGCGCGGTGGCCCGGGACCTGAACGTCTCCGAGCGCGAAGTGATGGAGATGGAGTCGCGCCTGTCCGGTCGCGACGTCGGTTTCGATGCGCCGTCCGACGAAGACGACGACCACGCACCGCCGTCGCCGGCGGCGTACCTGGTCGCGCGCGACGAGGACCCGTCGCAGGCCTACGAGCGCGAGGACAGCGAGGAAAACCAGCTGCAGCTGCTGCGCGAGGGCCTGGCCAACCTGGACCAGCGTTCGCGCGACATCATCGCCCGCCGCTGGCTCGATGCCGACAGCAAGGTGACGCTGCAGGAGCTTGCCGACGAGTATGGCGTGTCGGCCGAGCGCATCCGCCAGATCGAGGCCAACGCGCTGAAGAAGATGAAGGCGCTGTTCACCGCCTGA
PROTEIN sequence
Length: 292
MSQNTSTVLVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQELARRFRDEQDLDAARELVHSHLRFVVHVARGYNGYGLQLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEMHEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVSAVARDLNVSEREVMEMESRLSGRDVGFDAPSDEDDDHAPPSPAAYLVARDEDPSQAYEREDSEENQLQLLREGLANLDQRSRDIIARRWLDADSKVTLQELADEYGVSAERIRQIEANALKKMKALFTA*