ggKbase home page

scnpilot_p_inoc_scaffold_160

Search features with annotation key words

Displaying items 211-240 of 278 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_160_211
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203730..204785)
DNA (1056bp) protein (352aa)
ThiJ/PfpI family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K1T9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC86960.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxantho
ThiJ/PfpI
scnpilot_p_inoc_scaffold_160_212
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204880..205653)
DNA (774bp) protein (258aa)
Tropinone reductase n=3 Tax=Xanthomonas fuscans RepID=D4STC8_9XANT rbh
putative 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent
Putative 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent {ECO:0000313|EMBL:CDF63126.1}; TaxID=366649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xant
scnpilot_p_inoc_scaffold_160_213
unknown

Not on your lists

205743..205955
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_160_214
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206033..207940)
DNA (1908bp) protein (636aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
endopeptidase IV n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003733D01 rbh
signal peptide peptidase SppA, 67K type
scnpilot_p_inoc_scaffold_160_215
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208010..209437)
DNA (1428bp) protein (476aa)
Na-driven multidrug efflux pump n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTA9_STEMA rbh
Multidrug transporter MatE {ECO:0000313|EMBL:AHY57511.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotroph
Na-driven multidrug efflux pump rbh
scnpilot_p_inoc_scaffold_160_216
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209501..210076)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Xanthomonas campestris RepID=UPI0002D46767
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEM59850.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestri
scnpilot_p_inoc_scaffold_160_217
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210063..211073)
DNA (1011bp) protein (337aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F5EAF8 rbh
Membrane protein {ECO:0000313|EMBL:AHY57509.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
hypothetical protein
scnpilot_p_inoc_scaffold_160_218
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211561..213756
DNA (2196bp) protein (732aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=56458 species="Bacteria; Pr
primosome assembly protein PriA n=1 Tax=Xanthomonas sacchari RepID=UPI00026300B8 rbh
primosome assembly protein PriA rbh
scnpilot_p_inoc_scaffold_160_219
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213798..214907)
DNA (1110bp) protein (370aa)
ampC; beta-lactamase precursor (EC:3.5.2.6)
hypothetical protein, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003771EA0 rbh
Beta-lactamase {ECO:0000313|EMBL:AHY60880.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizo
scnpilot_p_inoc_scaffold_160_220
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(215050..216315)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037A5CEF rbh
Mannosyl-oligosaccharide 1,2-alpha-mannosidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glycoside hydrolase family 47
scnpilot_p_inoc_scaffold_160_221
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216296..219187)
DNA (2892bp) protein (964aa)
Beta-mannosidase {ECO:0000313|EMBL:CCH12512.1}; EC=3.2.1.25 {ECO:0000313|EMBL:CCH12512.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Ste
bmnA; beta-mannosidase (EC:3.2.1.25)
beta-mannosidase n=1 Tax=Pseudomonas geniculata RepID=UPI00029AB439 rbh
scnpilot_p_inoc_scaffold_160_222
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219226..220503)
DNA (1278bp) protein (426aa)
N-acylglucosamine 2-epimerase n=2 Tax=Stenotrophomonas maltophilia RepID=B4STQ8_STRM5 rbh
N-acylglucosamine 2-epimerase
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ACF51482.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas
scnpilot_p_inoc_scaffold_160_223
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220500..221495)
DNA (996bp) protein (332aa)
Fructokinase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LAF0_9GAMM rbh
Fructokinase {ECO:0000313|EMBL:EZP46604.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RI
scrK; fructokinase
scnpilot_p_inoc_scaffold_160_224
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221502..222809)
DNA (1308bp) protein (436aa)
MFS transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003761C26 rbh
Major facilitator transporter {ECO:0000313|EMBL:AHY59193.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotr
glucose-galactose transporter
scnpilot_p_inoc_scaffold_160_225
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222841..223902)
DNA (1062bp) protein (354aa)
Transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KN69_STEMA rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KDE90803.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas mal
scnpilot_p_inoc_scaffold_160_226
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224029..226479)
DNA (2451bp) protein (817aa)
alpha-1 2-mannosidase n=1 Tax=Pseudomonas geniculata RepID=UPI000299EEA5 rbh
Alpha-1,2-mannosidase {ECO:0000313|EMBL:EZP46607.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomon
hypothetical protein
scnpilot_p_inoc_scaffold_160_227
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227237..230317
DNA (3081bp) protein (1027aa)
TonB-denpendent receptor n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000368170E rbh
TonB-dependent receptor {ECO:0000313|EMBL:KFA28697.1}; TaxID=1094180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasic
TonB-dependent receptor
scnpilot_p_inoc_scaffold_160_228
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230416..231036)
DNA (621bp) protein (207aa)
glutathione S-transferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000306E3F4 rbh
Glutathione S-transferase {ECO:0000313|EMBL:AHY57507.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotropho
glutathione S-transferase family protein
scnpilot_p_inoc_scaffold_160_229
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231116..231892)
DNA (777bp) protein (259aa)
Protein containing DUF88 n=2 Tax=Stenotrophomonas RepID=B8L8C7_9GAMM rbh
Protein containing DUF88 {ECO:0000313|EMBL:EED40522.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
hypothetical protein
scnpilot_p_inoc_scaffold_160_230
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232014..233309
DNA (1296bp) protein (432aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:AEM52961.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEM52961.1};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomo
NADH dehydrogenase (Ubiquinone) n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K548_STEMA rbh
scnpilot_p_inoc_scaffold_160_231
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233322..233723)
DNA (402bp) protein (134aa)
aldehyde-activating protein n=1 Tax=Aeromonas hydrophila RepID=UPI0003684617
Uncharacterized protein {ECO:0000313|EMBL:EKB28640.1}; TaxID=1073377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SS
aldehyde-activating protein
scnpilot_p_inoc_scaffold_160_232
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233902..234777)
DNA (876bp) protein (292aa)
RNA polymerase sigma 70 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000366D051 rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria
rpoH; RNA polymerase factor sigma-32
scnpilot_p_inoc_scaffold_160_233
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234958..235692)
DNA (735bp) protein (245aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148};; TaxID=1195885 species="Bacteria; Proteobacteria;
Uracil-DNA glycosylase n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z2H4_XANCT rbh
uracil-DNA glycosylase
scnpilot_p_inoc_scaffold_160_234
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(235689..236531)
DNA (843bp) protein (281aa)
Two-component system response regulator n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZEV5_XANCT rbh
Two-component system response regulator {ECO:0000313|EMBL:EKU24251.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="X
histidine kinase
scnpilot_p_inoc_scaffold_160_235
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236539..237516)
DNA (978bp) protein (326aa)
cell division protein FtsX n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031719B0 rbh
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotro
cell division protein FtsX rbh
scnpilot_p_inoc_scaffold_160_236
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(237513..238199)
DNA (687bp) protein (229aa)
cell division protein FtsE n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000305573A rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY57413.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
ABC transporter
scnpilot_p_inoc_scaffold_160_237
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238300..240162)
DNA (1863bp) protein (621aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=1451188 species="
ATP-dependent RNA helicase RhlB n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K5X5_STEMA rbh
ATP-dependent RNA helicase rhlB
scnpilot_p_inoc_scaffold_160_238
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240183..240512
DNA (330bp) protein (110aa)
Thioredoxin n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZC34_XANCT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv.
thioredoxin
scnpilot_p_inoc_scaffold_160_239
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240734..242464
DNA (1731bp) protein (577aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=56458 species
Transcription termination factor Rho n=2 Tax=Stenotrophomonas maltophilia RepID=B4SLA6_STRM5 rbh
transcription termination factor Rho
scnpilot_p_inoc_scaffold_160_240
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242540..243409)
DNA (870bp) protein (290aa)
TonB family protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262A5EA rbh
Protein tonB {ECO:0000313|EMBL:CCP41956.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv.
TonB family protein
Displaying items 211-240 of 278 in total

View Taxonomy