ggKbase home page

scnpilot_p_inoc_scaffold_160

Search features with annotation key words

Displaying items 241-270 of 278 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_160_241
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(243469..245187)
DNA (1719bp) protein (573aa)
Isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L6D0_STEMA rbh
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256
aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase
scnpilot_p_inoc_scaffold_160_242
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245339..247564)
DNA (2226bp) protein (742aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:AHY57397.1}; EC=1.1.1.42 {ECO:0000313|EMBL:AHY57397.1};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadace
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D52D1D rbh
scnpilot_p_inoc_scaffold_160_243
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247912..248397)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TX61_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZP45198.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
hypothetical protein
scnpilot_p_inoc_scaffold_160_244
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248441..248740)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7SYN8_STEMA
Peptidoglycan-binding protein LysM {ECO:0000313|EMBL:KKD56863.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomo
LysM peptidoglycan degradation protein
scnpilot_p_inoc_scaffold_160_245
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248846..249658)
DNA (813bp) protein (271aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VSQ9_STEMA rbh
queF; 7-cyano-7-deazaguanine reductase
scnpilot_p_inoc_scaffold_160_246
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249863..251179)
DNA (1317bp) protein (439aa)
Putative amidohydrolase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FJS2_STRMK rbh
amidohydrolase
Putative amidohydrolase {ECO:0000313|EMBL:CAQ47665.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltop
scnpilot_p_inoc_scaffold_160_247
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

251390..252637
DNA (1248bp) protein (416aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000310E21A rbh
Membrane protein {ECO:0000313|EMBL:AHY57392.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
mdtA; multidrug efflux system subunit A, membrane fusion protein
scnpilot_p_inoc_scaffold_160_248
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252802..256038
DNA (3237bp) protein (1079aa)
acriflavine resistance protein B n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A57250 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP79391.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
acriflavin resistance protein
scnpilot_p_inoc_scaffold_160_249
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256035..259154
DNA (3120bp) protein (1040aa)
acriflavin resistance protein n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI000372AFE0 rbh
Acriflavin resistance protein {ECO:0000313|EMBL:AJC46978.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas s
acriflavin resistance protein
scnpilot_p_inoc_scaffold_160_250
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259994..260671
DNA (678bp) protein (226aa)
macrolide ABC transporter ATP-binding protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034770D6 rbh
ABC transporter {ECO:0000313|EMBL:EYR69775.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ABC transporter-like protein
scnpilot_p_inoc_scaffold_160_251
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

260652..261638
DNA (987bp) protein (329aa)
Hemolysin D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR69883.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
secretion protein HylD
scnpilot_p_inoc_scaffold_160_252
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

261635..262621
DNA (987bp) protein (329aa)
Hemolysin D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EYR69882.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
membrane-fusion protein
scnpilot_p_inoc_scaffold_160_253
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

262618..263877
DNA (1260bp) protein (420aa)
Membrane-fusion protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY5_9GAMM rbh
Membrane protein {ECO:0000313|EMBL:EYR69774.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;
membrane-fusion protein
scnpilot_p_inoc_scaffold_160_254
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

263874..265124
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VQY4_9GAMM rbh
ABC transporter permease {ECO:0000313|EMBL:EYR69773.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsic
hypothetical protein
scnpilot_p_inoc_scaffold_160_255
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265949..267385)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7UPY8_STEMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EJP77995.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
scnpilot_p_inoc_scaffold_160_256
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267439..268011)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D67A23
Uncharacterized protein {ECO:0000313|EMBL:AHY60545.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein
scnpilot_p_inoc_scaffold_160_257
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268008..268757)
DNA (750bp) protein (250aa)
Putative hydrolase of the HAD superfamily n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T477_XANCT rbh
Putative hydrolase of the HAD superfamily {ECO:0000313|EMBL:CCP41933.1}; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source=
haloacid dehalogenase
scnpilot_p_inoc_scaffold_160_258
Necator americanus, Necator, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(268843..269181)
DNA (339bp) protein (113aa)
calcium-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000306984D
EF hand {ECO:0000313|EMBL:ETN72382.1}; TaxID=51031 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator.;"
EF hand repeat-containing protein
scnpilot_p_inoc_scaffold_160_259
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269405..269785)
DNA (381bp) protein (127aa)
Putative transmembrane protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HGL1_XANCT
Putative transmembrane protein {ECO:0000313|EMBL:ELQ17220.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomona
hypothetical protein
scnpilot_p_inoc_scaffold_160_260
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269912..270616)
DNA (705bp) protein (235aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924, ECO:0000256|PIRNR:PIRNR026671};; EC=3.4
D-alanyl-D-alanine dipeptidase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A347 rbh
D-alanyl-D-alanine dipeptidase rbh
scnpilot_p_inoc_scaffold_160_261
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(270638..272677)
DNA (2040bp) protein (680aa)
hypothetical protein Tax=RBG_13_Aminicenantes_62_12_curated
sugar phosphate isomerase id=24398892 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
hypothetical protein
scnpilot_p_inoc_scaffold_160_262
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272736..273494)
DNA (759bp) protein (253aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7HGP6_XANCT rbh
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ELQ17255.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xantho
N-acetylmuramoyl-L-alanine amidase
scnpilot_p_inoc_scaffold_160_263
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273638..276526)
DNA (2889bp) protein (963aa)
Putative TonB dependent receptor n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWS2_PSEUP
TonB-dependent receptor {ECO:0000313|EMBL:KGM54884.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
putative TonB dependent receptor
scnpilot_p_inoc_scaffold_160_264
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277052..278608)
DNA (1557bp) protein (519aa)
penicillin-binding protein 4 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DDFC86 rbh
Penicillin-binding protein {ECO:0000313|EMBL:AHY60551.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotroph
beta-lactamase
scnpilot_p_inoc_scaffold_160_265
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(278626..279456)
DNA (831bp) protein (277aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WW40_9GAMM
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AHX14185.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jian
scnpilot_p_inoc_scaffold_160_266
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279453..280733)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036F6185
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
diaminopimelate decarboxylase
scnpilot_p_inoc_scaffold_160_267
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280829..283846)
DNA (3018bp) protein (1006aa)
TonB-dependent receptor plug n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVW1_PSEUU rbh
Energy transducer TonB {ECO:0000313|EMBL:KGM52201.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concreti
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_160_268
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(283896..285323)
DNA (1428bp) protein (476aa)
transglutaminase, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003737108 rbh
Transglutaminase {ECO:0000313|EMBL:AKC87121.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas s
transglutaminase
scnpilot_p_inoc_scaffold_160_269
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285507..286955
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003731B9A rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY60555.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
NLP/P60 protein
scnpilot_p_inoc_scaffold_160_270
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286952..288049
DNA (1098bp) protein (366aa)
chloromuconate cycloisomerase (EC:5.5.1.7)
L-alanine-DL-glutamate epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003032748 rbh
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:AHY60556.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Sten
Displaying items 241-270 of 278 in total

View Taxonomy