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scnpilot_p_inoc_scaffold_160_247

Organism: SCNpilot_P_inoc_Stenotrophomonas_69_27

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 251390..252637

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000310E21A similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 418.0
  • Bit_score: 519
  • Evalue 2.60e-144
  • rbh
Membrane protein {ECO:0000313|EMBL:AHY57392.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 415.0
  • Bit_score: 506
  • Evalue 4.20e-140
mdtA; multidrug efflux system subunit A, membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 418.0
  • Bit_score: 502
  • Evalue 1.20e-139

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGTCGCGTTTCTGGAAGATCGTGCTGCTCGTCATCGCCGTCCTGCTGGTGGCGGGAATCGGCTACCGGATGATGGGAGGCGGCAAGCAGGCCGGGGACCCGGCACAGGCGGCGGGCGGCGGCCGGGGCGGCGGCGACAGGGCGCGCGACCCGGTGCCGGTCACCGTGGTGGCGGCCGAGCGCAGGAACGTGCCGGTGTATGTCACCGCGCAGGGCACGGTGGCCGCCTACAACACGGTCACGGTCAGCCCGCAGGTCGGCGGCGAGCTGCTCAGCGTCGACTTCAAGGAAGGCCAGGCGGTGAAGAAGGGCGACCTGCTGGCCCGGATCGACCCGCGCACCTTCCAGGCCCAGTACGACCAGGCCCTCGCCAGCCAGCGCCAGAACCAGGCCCTGCTGGCCACCGCCCAGTCCAACTACGAGCGTTCCAATTCCGAGGCCTACCGCCAGTACGTGGCGCAGACCGACCTGACCACCCTGCGCAACCAGGTGGCCCAGTACCAGGCGGCCGTGGCCGCCGCCCAGGCCACGGCCAACCAGAGCAGGGTGCAGCTGGGCTACACCCGCATCGTCTCGCCCATCGACGGCGTGGCCGGCATCCGCGCGGTCGATCCCGGCAACGTCGTCAGCGCCGGCACGGCGATCGTCACCCTCACCCAGCTGCAGCCGATCCACGTGCTGTTCAACCTGCCCGAACAGCAGTTGGACGCGGTGCGCGCGGCGCAGGCCAAGGGGCCACTGGAAGCGGCGACGCTGGACCGCGCCGGCGGCAGCGTGGTCAACGCCGACGGCAAGCTGCAGGTGGTGGACAACCAGATCAGCGCCACCAGCGGCACCTTCCGCCTGCGCGCCGAGTTCCCCAACGCCGACCAGGCGCTGTGGCCGGGCCAGTTCGTCAACGTGCGCATGAAGCTCGACGAGCTGCCCGGCGCGGTAGTGGTGCCGGCCGAGGCCGTGCAGCGCAGCAGCACCGGCGATTTCGTCTACCTGGTCAAGCCGGACGACGCCGTCACCCTGCGCGACGTGGTGCAGGGCGGCCAGGTCGACGACAGCCATGTGGTCATCAGCAAGGGCCTGCAGCCGGGCGACAAGGTGGTCACCGAAGGCCAGTTCCGGCTCAAGGAAGGCGTCAAGGTCATTCCGCTGCAGCCGGGCCAGGCACCGCCGGAGCCGACCGAGGCGCAGTTGAAGGCCGCCAGCGAGAAGCGCGGCGGCGGCGGCGGCCGGGGCGGTCGTGGCCCGCGCTGA
PROTEIN sequence
Length: 416
MSRFWKIVLLVIAVLLVAGIGYRMMGGGKQAGDPAQAAGGGRGGGDRARDPVPVTVVAAERRNVPVYVTAQGTVAAYNTVTVSPQVGGELLSVDFKEGQAVKKGDLLARIDPRTFQAQYDQALASQRQNQALLATAQSNYERSNSEAYRQYVAQTDLTTLRNQVAQYQAAVAAAQATANQSRVQLGYTRIVSPIDGVAGIRAVDPGNVVSAGTAIVTLTQLQPIHVLFNLPEQQLDAVRAAQAKGPLEAATLDRAGGSVVNADGKLQVVDNQISATSGTFRLRAEFPNADQALWPGQFVNVRMKLDELPGAVVVPAEAVQRSSTGDFVYLVKPDDAVTLRDVVQGGQVDDSHVVISKGLQPGDKVVTEGQFRLKEGVKVIPLQPGQAPPEPTEAQLKAASEKRGGGGGRGGRGPR*