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scnpilot_p_inoc_scaffold_658

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_658_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_658_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(72..812)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036341BB
Mg chelatase-like protein {ECO:0000313|EMBL:KHK97507.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ATPase with chaperone activity
scnpilot_p_inoc_scaffold_658_3
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(809..1171)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F20E5
UPF0102 protein RS83_03126 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
endonuclease distantly
scnpilot_p_inoc_scaffold_658_4
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1265..1588)
DNA (324bp) protein (108aa)
CTP synthase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X6E9_9MICO
CTP synthase {ECO:0000313|EMBL:GAD33071.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_658_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1652..2320)
DNA (669bp) protein (223aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
ribonuclease HII n=1 Tax=Microbacterium yannicii RepID=UPI0002EFCA72
ribonuclease HII
scnpilot_p_inoc_scaffold_658_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2317..3084)
DNA (768bp) protein (256aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;"
Signal peptidase I n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B3J4_9MICO
signal peptidase I
scnpilot_p_inoc_scaffold_658_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(3229..3576)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Microbacterium yannicii RepID=UPI0003033D10
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source=
rplS; ribosomal protein L19
scnpilot_p_inoc_scaffold_658_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3737..4228)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003811AEB
Uncharacterized protein {ECO:0000313|EMBL:KJL35319.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_658_9
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4342..5124
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X6F6_9MICO
methionine aminopeptidase
scnpilot_p_inoc_scaffold_658_10
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5145..6566)
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" sour
pyruvate kinase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034D85AE
pyk; pyruvate kinase II
scnpilot_p_inoc_scaffold_658_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6694..7386)
DNA (693bp) protein (231aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002E54C68 rbh
trmD; tRNA-(guanine-N1)-methyltransferase
scnpilot_p_inoc_scaffold_658_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7388..7963)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376B493
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" so
rimM; RimM protein
scnpilot_p_inoc_scaffold_658_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8034..8264)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367D1BD
UPF0109 protein LK09_12185 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
RNA-binding protein
scnpilot_p_inoc_scaffold_658_14
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(8269..8700)
DNA (432bp) protein (144aa)
30S ribosomal protein S16 n=1 Tax=Microbacterium yannicii RepID=UPI0002D525F1
rpsP; ribosomal protein S16
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_p_inoc_scaffold_658_15
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8938..10098
DNA (1161bp) protein (387aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=150
carboxylate-amine ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5C5BC
hypothetical protein
scnpilot_p_inoc_scaffold_658_16
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10109..10567
DNA (459bp) protein (153aa)
Isoprenylcysteine carboxyl methyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPT6_ROSCS
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KGM11230.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbo
hypothetical protein
scnpilot_p_inoc_scaffold_658_17
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10578..12353)
DNA (1776bp) protein (592aa)
general secretory system II protein E domain-containing protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002886921 rbh
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:CCH78577.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jap
membrane-bound glycosyl transferase
scnpilot_p_inoc_scaffold_658_18
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12350..13534)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B464CD
Uncharacterized protein {ECO:0000313|EMBL:CCH78578.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
hypothetical membrane protein
scnpilot_p_inoc_scaffold_658_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13633..15201)
DNA (1569bp) protein (523aa)
signal recognition particle n=1 Tax=Microbacterium yannicii RepID=UPI0002D512ED
ffh; signal recognition particle GTPase
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteri
scnpilot_p_inoc_scaffold_658_20
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15237..15677)
DNA (441bp) protein (147aa)
Transcriptional regulator n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQM7_9MICO
Transcriptional regulator {ECO:0000313|EMBL:GAD33083.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_658_21
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15876..16514
DNA (639bp) protein (213aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000
octanoyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003483EC2
lipB; lipoate-protein ligase B
scnpilot_p_inoc_scaffold_658_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16511..17557
DNA (1047bp) protein (349aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=2 Tax=Microbacterium RepID=H8E4E6_9MICO
lipA; lipoate synthase
scnpilot_p_inoc_scaffold_658_23
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17574..18074)
DNA (501bp) protein (167aa)
galactose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002DD63B2
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:KEP76256.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
galactose-1-phosphate uridyltransferase
scnpilot_p_inoc_scaffold_658_24
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18131..18961)
DNA (831bp) protein (277aa)
cell division protein FtsY n=1 Tax=Microbacterium yannicii RepID=UPI0002FF7231
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Micr
ftsY; signal recognition particle GTPase
scnpilot_p_inoc_scaffold_658_25
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19019..22525)
DNA (3507bp) protein (1169aa)
chromosome segregation protein SMC n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B3222
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral
smc; chromosome segregation ATPase
scnpilot_p_inoc_scaffold_658_26
unknown

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22730..22825
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_658_27
unknown

Not on your lists

22986..23228
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_658_28
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23243..24322
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EDF063
Histone acetyltransferase HPA2 {ECO:0000313|EMBL:GAD33091.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
histone acetyltransferase HPA2
scnpilot_p_inoc_scaffold_658_29
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24312..25235)
DNA (924bp) protein (308aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003731035 rbh
formamidopyrimidine-DNA glycosylase
scnpilot_p_inoc_scaffold_658_30
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25280..25966)
DNA (687bp) protein (229aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
ribonuclease III n=1 Tax=Microbacterium yannicii RepID=UPI0002DB5D3B
rnc; dsRNA-specific ribonuclease
Displaying items 1-30 of 60 in total

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