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scnpilot_p_inoc_scaffold_355_6

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 5348..6187

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003820440 similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 276.0
  • Bit_score: 320
  • Evalue 2.00e-84
Shikimate dehydrogenase {ECO:0000313|EMBL:KHK98982.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.3
  • Coverage: 278.0
  • Bit_score: 300
  • Evalue 1.80e-78
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 275.0
  • Bit_score: 287
  • Evalue 4.10e-75

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGACGCAGCGACGTACGCGTCTGGAGGTCTGGGGTGACCCGATCGAGCACAGTCGGTCACCCCAGCTCCACGCTGCCGCGTACCGCGCGCTCGGCCTGGATTGGTCCTACGGACGCCGCCGCGTCTCGGCGGAGAGCTTCCCTTCGGAGTTGCACTCGCTCGACGACGCCTTCCGAGGCCTGTCGGTCACGTATCCACTCAAAGAAGCGGCTTTTGCGGCATCCGTTACCCGCGATGCGCGTGCGGAACTTACCGGAGCCGTAAACACCGTTCTGCTGACCGGTGCCGGGCCTTCCGGATTCAACACGGACGTCGGCGGCATCGTCGGGTCTCTCGCCGAGTGCGGAATCACCGAGTTGCGTCGCGTCAGGATCGTCGGGGCAGGCGCCACGGCGACATCTGCGCTCGTGGCTGTCACGGAGCTTGGTGCGGACGAGATCGAGGTCGCAGCCCGGCGGCCTGAAGCTGTCGCCGGGCTCCGCGAGATCGGCGACAGGCGTGGACTCACCGTTCGCGGCGTCCCTCTCGCGCAGCCTGAGCTTGCACCTGTCGACCTGACGATCGCGGCGCTCCCCGGCGGTGCTGTGGTGGCTGACGCAGGCGCCGATCGGCTCGCATCGGGCGGTGGGGCGTTGTTCGACGTTGTCTACGGGCAAGGGATGACGTCCCTGCAGGCCGCCTGGCTCCGCGCCGGTCATCCGATTCATACGGGAGAAGGGATGCTGCTGCACCAGGCGGTGCTGCAAGTGCGGATCTTCGTCGGCGGCGATCCGGCAGTGCCACTTCGCGACGAGTCGACTGTTGTCGGCGCGATGCGAGCAAGCCTCATGGGAGACTAG
PROTEIN sequence
Length: 280
VTQRRTRLEVWGDPIEHSRSPQLHAAAYRALGLDWSYGRRRVSAESFPSELHSLDDAFRGLSVTYPLKEAAFAASVTRDARAELTGAVNTVLLTGAGPSGFNTDVGGIVGSLAECGITELRRVRIVGAGATATSALVAVTELGADEIEVAARRPEAVAGLREIGDRRGLTVRGVPLAQPELAPVDLTIAALPGGAVVADAGADRLASGGGALFDVVYGQGMTSLQAAWLRAGHPIHTGEGMLLHQAVLQVRIFVGGDPAVPLRDESTVVGAMRASLMGD*