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scnpilot_p_inoc_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_355_1
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..120
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIY3_9MICO
Contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89898.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
transposase and inactivated derivatives
scnpilot_p_inoc_scaffold_355_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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238..534
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003601405
Fe3+-hydroxamate ABC transporter substrate-bindng protein {ECO:0000313|EMBL:GAD33219.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mi
ATPase
scnpilot_p_inoc_scaffold_355_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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598..3258
DNA (2661bp) protein (887aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000379F280
alaS; alanyl-tRNA synthetase
scnpilot_p_inoc_scaffold_355_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3255..3728
DNA (474bp) protein (158aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263625 speci
Holliday junction resolvase n=1 Tax=Microbacterium yannicii RepID=UPI0002E082F4
endonuclease
scnpilot_p_inoc_scaffold_355_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3730..5346
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003752943 rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:CDK00834.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
periplasmic solute-binding protein
scnpilot_p_inoc_scaffold_355_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5348..6187
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003820440
Shikimate dehydrogenase {ECO:0000313|EMBL:KHK98982.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
shikimate 5-dehydrogenase
scnpilot_p_inoc_scaffold_355_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6192..7436
DNA (1245bp) protein (415aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360217E
chorismate synthase
scnpilot_p_inoc_scaffold_355_8
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7423..7974
DNA (552bp) protein (184aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1504156 species="Bacteria; Actinobacteria; Microc
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DC0CB
shikimate kinase
scnpilot_p_inoc_scaffold_355_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7971..9047
DNA (1077bp) protein (359aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=162426 species="Bacteria
3-dehydroquinate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003491969
aroB; 3-dehydroquinate synthetase
scnpilot_p_inoc_scaffold_355_10
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9074..9529
DNA (456bp) protein (152aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=2 Tax=Microbacterium RepID=H8E3E1_9MICO
aroQ; 3-dehydroquinate dehydratase II
scnpilot_p_inoc_scaffold_355_11
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9574..10230
DNA (657bp) protein (219aa)
Transcriptional regulator n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X0N6_9NOCA
TetR family transcriptional regulator {ECO:0000313|EMBL:GAM49646.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
scnpilot_p_inoc_scaffold_355_12
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10227..11081
DNA (855bp) protein (285aa)
fadB4; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157) rbh
Putative 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YT03_NOCFA rbh
Putative 3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:BAD58688.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain
scnpilot_p_inoc_scaffold_355_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11258..11818
DNA (561bp) protein (187aa)
elongation factor P n=1 Tax=Microbacterium yannicii RepID=UPI000314D9EB rbh
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.
efp; translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
scnpilot_p_inoc_scaffold_355_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11822..12256
DNA (435bp) protein (145aa)
transcription antitermination protein NusB n=1 Tax=Microbacterium yannicii RepID=UPI00031A62B0
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1348253 species="Bacteria; Acti
nusB; transcription termination factor
scnpilot_p_inoc_scaffold_355_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12335..13900
DNA (1566bp) protein (522aa)
Predicted Zn-dependent hydrolase of the beta-lactamase fold n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL4_MICTS
Zn-dependent hydrolase of the beta-lactamase fold
Predicted Zn-dependent hydrolase of the beta-lactamase fold {ECO:0000313|EMBL:BAJ76496.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
scnpilot_p_inoc_scaffold_355_16
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13972..14502
DNA (531bp) protein (177aa)
uracil phosphoribosyltransferase n=1 Tax=Microbacterium sp. 11MF RepID=UPI00035E3CCF
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pyrR; pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
scnpilot_p_inoc_scaffold_355_17
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14499..15479
DNA (981bp) protein (327aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1451261 species="Ba
Aspartate carbamoyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL8_MICTS
pyrB; aspartate carbamoyltransferase, catalytic chain
scnpilot_p_inoc_scaffold_355_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15476..16786
DNA (1311bp) protein (437aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1504156 species="
Dihydroorotase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFL9_MICTS
pyrC; dihydroorotase
scnpilot_p_inoc_scaffold_355_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16783..17304
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000307F404
Uncharacterized protein {ECO:0000313|EMBL:KJL35754.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_p_inoc_scaffold_355_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17301..18458
DNA (1158bp) protein (386aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carbamoyl phosphate synthase small subunit n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C2B3D
carA; carbamoylphosphate synthase small subunit
scnpilot_p_inoc_scaffold_355_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18451..21738
DNA (3288bp) protein (1096aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
Carbamoyl-phosphate synthase large chain n=1 Tax=Microbacterium sp. TS-1 RepID=U2X5X0_9MICO
carB; carbamoylphosphate synthase large subunit
scnpilot_p_inoc_scaffold_355_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21735..22589
DNA (855bp) protein (285aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512, ECO:0000256|SAAS:SAAS00032220};; TaxID=400772 species="
Orotidine 5'-phosphate decarboxylase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFM3_MICTS
orotidine-5'-phosphate decarboxylase
scnpilot_p_inoc_scaffold_355_23
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22582..23490
DNA (909bp) protein (303aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQ32_9MICO
gmk; guanylate kinase
scnpilot_p_inoc_scaffold_355_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23551..23805
DNA (255bp) protein (85aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Microbacterium yannicii RepID=UPI0002F5285A
rpoZ; DNA-directed RNA polymerase, subunit K/omega
scnpilot_p_inoc_scaffold_355_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23879..25072
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFM6_MICTS
metK; S-adenosylmethionine synthetase
scnpilot_p_inoc_scaffold_355_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25074..27068
DNA (1995bp) protein (665aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1160710 species="B
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E4D02F
primosomal protein N' (replication factor Y) - superfamily II helicase
scnpilot_p_inoc_scaffold_355_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27065..28024
DNA (960bp) protein (320aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=979556 species="B
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003642AA1
fmt; methionyl-tRNA formyltransferase
scnpilot_p_inoc_scaffold_355_28
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28021..29403
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00038266D2
tRNA and rRNA cytosine-C5-methylase {ECO:0000313|EMBL:GAD32874.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.
tRNA and rRNA cytosine-C5-methylase
scnpilot_p_inoc_scaffold_355_29
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29430..30125
DNA (696bp) protein (232aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbact
Ribulose-phosphate 3-epimerase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XI26_9MICO
pentose-5-phosphate-3-epimerase
scnpilot_p_inoc_scaffold_355_30
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30160..30423
DNA (264bp) protein (88aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
hisE; phosphoribosyl-ATP diphosphatase (EC:3.6.1.31)
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347DE0D
Displaying items 1-30 of 96 in total

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