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scnpilot_p_inoc_scaffold_355_24

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: 23551..23805

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 84.0
  • Bit_score: 158
  • Evalue 4.30e-36
DNA-directed RNA polymerase subunit omega n=1 Tax=Microbacterium yannicii RepID=UPI0002F5285A similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 84.0
  • Bit_score: 158
  • Evalue 3.10e-36
rpoZ; DNA-directed RNA polymerase, subunit K/omega similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 84.0
  • Bit_score: 157
  • Evalue 1.90e-36

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGGGAACAACAAGGGCATCATCGACCCCCCCATCGACAGCCTTCTCGAGAAGGTTGACTCGAAGTACCAGCTGGTGATCTACGCATCAAAGCGCGCCCGCCAGATCAACGACTACTACTCCGACCTGCACGAGGGAAACCTCTTCGACAACGTGGGACCGCTGGTTGATTCAACCGTCGAGGACAAGCCGCTGACCATCGCGCTCCACGAGATCAACGAAGACAAGCTTCGCCTCCGTCCGATCGACTGA
PROTEIN sequence
Length: 85
MAGNNKGIIDPPIDSLLEKVDSKYQLVIYASKRARQINDYYSDLHEGNLFDNVGPLVDSTVEDKPLTIALHEINEDKLRLRPID*