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scnpilot_p_inoc_scaffold_321_20

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(20475..20855)

Top 3 Functional Annotations

Value Algorithm Source
Zn finger protein HypA/HybF (Possibly regulating hydrogenase expression) n=1 Tax=Frankia sp. QA3 RepID=I9KH79_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 115.0
  • Bit_score: 123
  • Evalue 1.30e-25
Hydrogenase nickel incorporation protein HypA {ECO:0000313|EMBL:KJL36251.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 121.0
  • Bit_score: 170
  • Evalue 1.60e-39
hypA2; hydrogenase nickel incorporation protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 115.0
  • Bit_score: 123
  • Evalue 3.50e-26

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGCACGAGCTGTCGTTGTGCCGATCGATCGCTGCGATCGCTGAGCGTTCGAGCGCGGGCCGCCCCGTGCTCTCGATCCAGCTCGATGTCGGTCAGCTCCGCCAGGTGGTGCCCGACACTCTCGTGTATTGCTGGGGCATCGTGTGCGAGAACTCGCCATCGCTGTCCGGATCGCGGCTCGAGGTGACCTCGATCCCGGCCATCGTCACGTGCCGCGAGTGCTCCACGGATTCGACGATCGAGGGCGTGCCGATCCTCGTGTGCGCGTCATGCGGAAGTGGATCGGTGGTCGTACGATCTGGGGAGGAATTCCTCGTCCGGTCAATGGAGGTCGGCGAAAAGGAAGGGAAGACCGATGGGTCGCTTTCACCGCCACGATGA
PROTEIN sequence
Length: 127
MHELSLCRSIAAIAERSSAGRPVLSIQLDVGQLRQVVPDTLVYCWGIVCENSPSLSGSRLEVTSIPAIVTCRECSTDSTIEGVPILVCASCGSGSVVVRSGEEFLVRSMEVGEKEGKTDGSLSPPR*