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scnpilot_p_inoc_scaffold_321_21

Organism: SCNpilot_P_inoc_Microbacterium_67_17

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 11 / 38
Location: comp(20933..21919)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Nocardioides sp. CF8 RepID=R7XS19_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 328.0
  • Bit_score: 239
  • Evalue 5.30e-60
Regulatory protein SoxS {ECO:0000313|EMBL:KJL36252.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 328.0
  • Bit_score: 384
  • Evalue 1.40e-103
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 336.0
  • Bit_score: 223
  • Evalue 6.60e-56

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGCCCGTCCCCTGCGCACGCCGCCGGCGCTGGCGAGTGCCCCCTCGGTGCGCACCGACGACCCCCGGCGTCTCGCCGGCGAACTCGGGACTCTCCTCGGGGAGGGCACCGTCGCCGTCCACGACAACCGCGCGAGTCTCGACGGCGCGCTGTTCACGCGGAGCTTCGACACGATCTCGTTGGGCTACCTGGATATCGGGACCCCCACCACGATCGACATCCCGGTCACCGCCGACGCCGTCACGGTTTGCATGAACCAGGGCGGAGCGCTCGCGGCGCGCGTGGACGGAGTCACGGTGCACACGACGACGGTTCAGGCGATCGTGCTCTCACCGCGCACGGCGGTGCGGCTGGAGATGACTCCCGAATCTCCCCAGCTCCTCGTCCGCCTCGAACGTCATGCCGTGGAGGCAGCCGTGGCTCGCACCCTCGGCCGGCGCGTCAGCGAACCGCTGCGGTTTGAGCCGCTGTTCGATCTGAGCTCTCCCGAAAGCATCCGGTGGAGCATCGCGGTGCAGCTGCTGAGCACCGAATCCATGACCGATTCGTCGCTGCTGACCCTGCCCCTGGGTCGACAGAGCGTCGCCGACCTCCTGGTCGCATCCCTGCTCCTGCTGCAGCCCTCGAACTATTCCAGCTCGCTGAGGCGACAGGCAACGTCGGGTCTCATGGTTGACGCCCTCGCCTACATCGAGCAGCATCTGGCCGAGCCGTTCTCGCTGGCGGTCCTTGCCCACGCGGTGCATGTCTCTCCGCGCCATCTGCAGCAGACCTTCCGCGACCGCCTGGGCACAACGCCGTCAGGATACGTTCGCGACCAGCGACTGCAGCGGGTGCGCATCGATCTGACGGATGCCGACCCCAGGCGCGGCGCGACAGTCGCGGGGATCGCCCAGCGGTGGGGGTTTACCCACGCCGGCCGGTTCGCGAACGAGTACCGCGACCGCTTCGGAGAATCGCCGTCTCGCACCCTTCGCGGCGCGTGA
PROTEIN sequence
Length: 329
MARPLRTPPALASAPSVRTDDPRRLAGELGTLLGEGTVAVHDNRASLDGALFTRSFDTISLGYLDIGTPTTIDIPVTADAVTVCMNQGGALAARVDGVTVHTTTVQAIVLSPRTAVRLEMTPESPQLLVRLERHAVEAAVARTLGRRVSEPLRFEPLFDLSSPESIRWSIAVQLLSTESMTDSSLLTLPLGRQSVADLLVASLLLLQPSNYSSSLRRQATSGLMVDALAYIEQHLAEPFSLAVLAHAVHVSPRHLQQTFRDRLGTTPSGYVRDQRLQRVRIDLTDADPRRGATVAGIAQRWGFTHAGRFANEYRDRFGESPSRTLRGA*