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scnpilot_p_inoc_scaffold_72

Search features with annotation key words

Displaying items 31-60 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_72_31
unknown

Not on your lists

39717..40082
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_32
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

40208..42469
DNA (2262bp) protein (754aa)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ACU64452.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ACU64452.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinop
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSK3_CHIPD
(p)ppGpp synthetase I SpoT/RelA
scnpilot_p_inoc_scaffold_72_33
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42562..44091)
DNA (1530bp) protein (510aa)
GMP synthase (EC:6.3.5.2) rbh
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO
GMP synthase n=1 Tax=Empedobacter brevis RepID=UPI000366C2B0 rbh
scnpilot_p_inoc_scaffold_72_34
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44187..44495)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Polaribacter franzmannii RepID=UPI0003763642
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ42008.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
scnpilot_p_inoc_scaffold_72_35
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44758..45579)
DNA (822bp) protein (274aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUY3_9SPHI rbh
methionine aminopeptidase
scnpilot_p_inoc_scaffold_72_36
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45607..46977)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=2 Tax=Myroides RepID=K1HUY9_9FLAO rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ41937.1}; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratu
Hemolysin
scnpilot_p_inoc_scaffold_72_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47291..48868
DNA (1578bp) protein (526aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphing
Ribonuclease Y n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU48_CHIPD
phosphodiesterase
scnpilot_p_inoc_scaffold_72_38
unknown

Not on your lists

49115..49474
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_39
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49534..51897)
DNA (2364bp) protein (788aa)
Transketolase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUA4_CHIPD
transketolase
Transketolase domain protein {ECO:0000313|EMBL:ACU59144.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
scnpilot_p_inoc_scaffold_72_40
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(52125..52325)
DNA (201bp) protein (67aa)
CsbD family protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RWH4_LEAB4
csbd family protein
CsbD family protein {ECO:0000313|EMBL:ADQ18914.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain D
scnpilot_p_inoc_scaffold_72_41
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52461..54326)
DNA (1866bp) protein (622aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCQ2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61401.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_p_inoc_scaffold_72_42
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54379..55335)
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002D2703C
Uncharacterized protein {ECO:0000313|EMBL:KIC93456.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_72_43
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(55340..55915)
DNA (576bp) protein (192aa)
RNA polymerase subunit sigma-24 n=1 Tax=Dyadobacter beijingensis RepID=UPI0003620A11
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT94044.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
scnpilot_p_inoc_scaffold_72_44
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

56137..57390
DNA (1254bp) protein (418aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=700598 speci
Peptidase T n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKZ6_NIAKG
peptidase T
scnpilot_p_inoc_scaffold_72_45
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

57409..58461
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000371F9A4
Uncharacterized protein {ECO:0000313|EMBL:KFD38694.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila
cytochrome c peroxidase
scnpilot_p_inoc_scaffold_72_46
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58761..59417)
DNA (657bp) protein (219aa)
Uncharacterized protein id=1926627 bin=GWE2_Bacteroidetes_42_39 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
hypothetical protein
scnpilot_p_inoc_scaffold_72_47
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59410..60117)
DNA (708bp) protein (236aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingo
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU42_CHIPD
hypothetical protein
scnpilot_p_inoc_scaffold_72_48
unknown

Not on your lists

comp(60140..60730)
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_49
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60864..61592)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036BAE21
Uncharacterized protein {ECO:0000313|EMBL:AHM59961.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
scnpilot_p_inoc_scaffold_72_50
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(61637..62728)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR63_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD07269.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source=
scnpilot_p_inoc_scaffold_72_51
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(62898..64274)
DNA (1377bp) protein (459aa)
hypothetical protein MsalJ2_18228 id=3012454 bin=GWF2_Ignavibacteria_33_9 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Inner membrane CreD family protein; K06143 inner membrane protein Tax=GWF2_RIF_IGX_33_9_curated
Inner membrane CreD family protein
scnpilot_p_inoc_scaffold_72_52
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(64288..64767)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DMU2_9FLAO
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
hypothetical protein
scnpilot_p_inoc_scaffold_72_53
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(64864..65163)
DNA (300bp) protein (100aa)
transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI00037342A0
Transcriptional regulator {ECO:0000313|EMBL:KIC96198.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibac
transcriptional regulator
scnpilot_p_inoc_scaffold_72_54
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(65160..65969)
DNA (810bp) protein (270aa)
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029AB529
Uncharacterized protein {ECO:0000313|EMBL:GAO41704.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_72_55
unknown

Not on your lists

comp(66237..66617)
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_72_56
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

67049..68992
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI00036F24DC
Uncharacterized protein {ECO:0000313|EMBL:KJS05045.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
scnpilot_p_inoc_scaffold_72_57
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

69227..72169
DNA (2943bp) protein (981aa)
outer membrane autotransporter barrel protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_72_58
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

72668..73618
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCD3_CHIPD
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
NAD-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_72_59
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(74242..78054)
DNA (3813bp) protein (1271aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PKD domain containing protein id=3884053 bin=GWF2_Bacteroidetes_33_16 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
PKD domain-containing protein
scnpilot_p_inoc_scaffold_72_60
unknown

Not on your lists

78182..78295
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying items 31-60 of 239 in total

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