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scnpilot_p_inoc_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_277_1
unknown

Not on your lists

comp(295..561)
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_277_2
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

999..2894
DNA (1896bp) protein (632aa)
DNA topoisomerase IV subunit B n=1 Tax=Segetibacter koreensis RepID=UPI0003672C88
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:GAO43906.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihu
DNA topoisomerase type IIA subunit B domain-containing protein
scnpilot_p_inoc_scaffold_277_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3524..4909)
DNA (1386bp) protein (462aa)
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:AEW02722.1}; EC=3.1.5.1 {ECO:0000313|EMBL:AEW02722.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteri
Deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG83_NIAKG
deoxyguanosinetriphosphate triphosphohydrolase
scnpilot_p_inoc_scaffold_277_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4924..5688)
DNA (765bp) protein (255aa)
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ACU58388.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ACU58388.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinopha
Exodeoxyribonuclease III Xth n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK47_CHIPD
exodeoxyribonuclease III Xth
scnpilot_p_inoc_scaffold_277_5
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5730..6464)
DNA (735bp) protein (245aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWA2_Bacteroidetes_31_9_curated
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JUR8_9BACT
short-chain dehydrogenase/reductase SDR
scnpilot_p_inoc_scaffold_277_6
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6533..8299)
DNA (1767bp) protein (589aa)
Putative MscS family protein.1 n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NYC2_9BACT
Putative MscS family protein.1 {ECO:0000313|EMBL:EMR03379.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanen
mechanosensitive ion channel protein MscS
scnpilot_p_inoc_scaffold_277_7
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8403..9728)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C7A9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EIJ39502.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 195
hypothetical protein
scnpilot_p_inoc_scaffold_277_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9751..11226)
DNA (1476bp) protein (492aa)
Permease YjgP/YjgQ family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD2_CHIPD
YjgP/YjgQ family permease
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ACU58821.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinop
scnpilot_p_inoc_scaffold_277_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11402..11785)
DNA (384bp) protein (128aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD4_CHIPD
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ACU58823.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_p_inoc_scaffold_277_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12012..12884
DNA (873bp) protein (291aa)
RNA polymerase, sigma 70 subunit, RpoD subfamily n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQD5_CHIPD
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:ACU58824.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" s
scnpilot_p_inoc_scaffold_277_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13037..14119
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03230.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
scnpilot_p_inoc_scaffold_277_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(14213..15241)
DNA (1029bp) protein (343aa)
Hemin-degrading family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YEK5_9SPHI rbh
Hemin-degrading family protein {ECO:0000313|EMBL:EHQ30765.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Muci
hemS; Hemin transport protein hmuS
scnpilot_p_inoc_scaffold_277_13
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15267..16073)
DNA (807bp) protein (269aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK56459.1}; EC=3.6.3.28 {ECO:0000313|EMBL:EFK56459.1};; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sph
hemin ABC transporter ATP-binding protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3D559
phosphonate-transporting ATPase
scnpilot_p_inoc_scaffold_277_14
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(16077..17117)
DNA (1041bp) protein (347aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IY13_9BACT
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AHF93813.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
scnpilot_p_inoc_scaffold_277_15
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17166..18020)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00037354F9
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ30566.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source
btuF; Hemin-binding periplasmic protein hmuT
scnpilot_p_inoc_scaffold_277_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18492..18713
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THA4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC90454.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
scnpilot_p_inoc_scaffold_277_17
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18834..19496)
DNA (663bp) protein (221aa)
Uncharacterized protein {ECO:0000313|EMBL:ETN94337.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
scnpilot_p_inoc_scaffold_277_18
unknown

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comp(19502..19639)
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_277_19
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20050..20253
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NRA4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI92996.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_277_20
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20307..20669
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2N4_9FLAO
MerC mercury resistance protein {ECO:0000313|EMBL:KFF16202.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseoba
uncharacterized protein
scnpilot_p_inoc_scaffold_277_21
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20666..21871
DNA (1206bp) protein (402aa)
4-hydroxytetrahydrobiopterin dehydratase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NG53_ELIME
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AIM39041.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
scnpilot_p_inoc_scaffold_277_22
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21901..22524
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036F0F8B
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGO88199.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavob
ABC transporter ATP-binding protein
scnpilot_p_inoc_scaffold_277_23
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22521..23738
DNA (1218bp) protein (406aa)
permease n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B3B9CB
Permease {ECO:0000313|EMBL:KGD68053.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.
permease
scnpilot_p_inoc_scaffold_277_24
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23731..24318
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R766_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:KFD39942.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila
hypothetical protein
scnpilot_p_inoc_scaffold_277_25
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24480..25781)
DNA (1302bp) protein (434aa)
Uncharacterized protein {ECO:0000313|EMBL:ESU26471.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium lim
scnpilot_p_inoc_scaffold_277_26
unknown

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comp(25843..26871)
DNA (1029bp) protein (343aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_277_27
unknown

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comp(26922..28070)
DNA (1149bp) protein (383aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_277_28
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

28192..30147
DNA (1956bp) protein (652aa)
two-component system sensor histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036FC98B
tetratricopeptide repeat protein,histidine kinase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_p_inoc_scaffold_277_29
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

30151..30810
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003807EE4
LuxR family two component transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_277_30
unknown

Not on your lists

comp(30956..31495)
DNA (540bp) protein (180aa)

This feature has no annotations

Displaying items 1-30 of 106 in total

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