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scnpilot_p_inoc_scaffold_334

Search features with annotation key words

Displaying items 121-142 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_334_121
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

126951..127415
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8W8_NIAKG
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Fl
Ribosome maturation factor rimP
scnpilot_p_inoc_scaffold_334_122
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

127440..128783
DNA (1344bp) protein (448aa)
NusA antitermination factor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHH1_CHIPD
nusA; transcription elongation factor NusA
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitino
scnpilot_p_inoc_scaffold_334_123
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

128971..132180
DNA (3210bp) protein (1070aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037193F9 rbh
translation initiation factor 2 (bIF-2); K02519 translation initiation factor IF-2 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
translation initiation factor 2 (bIF-2)
scnpilot_p_inoc_scaffold_334_124
unknown

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comp(132283..132396)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_334_125
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(132533..133093)
DNA (561bp) protein (187aa)
ATP/cobalamin adenosyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQ52_CHIPD
ATP/cobalamin adenosyltransferase
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:ACU64290.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinop
scnpilot_p_inoc_scaffold_334_126
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133098..134126)
DNA (1029bp) protein (343aa)
PhoH family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9N6_NIAKG
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:AEW00229.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (stra
scnpilot_p_inoc_scaffold_334_127
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

134757..136565
DNA (1809bp) protein (603aa)
GTP-binding protein TypA n=1 Tax=Niabella aurantiaca RepID=UPI00036ABC95
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:AHF15934.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 194
scnpilot_p_inoc_scaffold_334_128
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

136780..137502
DNA (723bp) protein (241aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacter
Dihydrodipicolinate reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NU72_9SPHI
dihydrodipicolinate reductase
scnpilot_p_inoc_scaffold_334_129
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

137741..138289
DNA (549bp) protein (183aa)
Putative uncharacterized protein id=4342136 bin=GWF2_Bacteroidetes_43_63 species=Leeuwenhoekiella blandensis genus=Leeuwenhoekiella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
Putative uncharacterized protein Tax=GWF2_Bacteroidetes_43_63_curated
hypothetical protein
scnpilot_p_inoc_scaffold_334_130
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(138296..140629)
DNA (2334bp) protein (778aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z4L3_FLABF
putative adhesin
Uncharacterized protein {ECO:0000313|EMBL:CCB68490.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bra
scnpilot_p_inoc_scaffold_334_131
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(140691..141788)
DNA (1098bp) protein (366aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG76_NIAKG
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEW02715.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae;
scnpilot_p_inoc_scaffold_334_132
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(141835..142920)
DNA (1086bp) protein (362aa)
fatty acid desaturase; K00508 linoleoyl-CoA desaturase [EC:1.14.19.3] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Linoleoyl-CoA desaturase n=1 Tax=Niabella soli DSM 19437 RepID=H1NNR6_9SPHI
fatty acid desaturase
scnpilot_p_inoc_scaffold_334_133
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143021..144178)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E69F2
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEW02716.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koree
scnpilot_p_inoc_scaffold_334_134
unknown

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comp(144262..145551)
DNA (1290bp) protein (430aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_334_135
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(145667..146917)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVG2_9FLAO
conserved transmembrane protein
Conserved transmembrane protein {ECO:0000313|EMBL:BAP29351.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseoba
scnpilot_p_inoc_scaffold_334_136
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

147008..147793
DNA (786bp) protein (262aa)
carbon-nitrogen hydrolase n=1 Tax=Niabella aurantiaca RepID=UPI00035FDF4D
Amidohydrolase {ECO:0000313|EMBL:KIC90982.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG6
carbon-nitrogen hydrolase
scnpilot_p_inoc_scaffold_334_137
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

147872..149020
DNA (1149bp) protein (383aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:AHJ97051.1}; EC=1.1.1.157 {ECO:0000313|EMBL:AHJ97051.1};; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B352E2 rbh
scnpilot_p_inoc_scaffold_334_138
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

149080..149595
DNA (516bp) protein (172aa)
Exonuclease (EC:2.7.7.7)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036158B2
Exonuclease {ECO:0000313|EMBL:KFC61145.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
scnpilot_p_inoc_scaffold_334_139
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(149702..150265)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PER6_CHIPD
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=485918 species="Bacteria;
scnpilot_p_inoc_scaffold_334_140
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(150361..152163)
DNA (1803bp) protein (601aa)
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:AEW01943.1}; EC=3.6.3.44 {ECO:0000313|EMBL:AEW01943.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobac
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365BE23
xenobiotic-transporting ATPase
scnpilot_p_inoc_scaffold_334_141
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152291..153784)
DNA (1494bp) protein (498aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N7_NIAKG
cysteinyl-tRNA synthetase
scnpilot_p_inoc_scaffold_334_142
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

153980..156568
DNA (2589bp) protein (863aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDY5_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61485.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
Displaying items 121-142 of 142 in total

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