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scnpilot_p_inoc_scaffold_334_139

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(149702..150265)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PER6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 187.0
  • Bit_score: 249
  • Evalue 2.90e-63
ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 187.0
  • Bit_score: 249
  • Evalue 8.30e-64
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=485918 species="Bacteria; similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 187.0
  • Bit_score: 249
  • Evalue 4.10e-63

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGTCAGAACAATTAGATCATATATTTTCTACTACCGATCTGCAGATGGATAAAGCTGTAGCACACTTAGATTCGGAACTGCTTAAAATAAGGGCAGGAAAAGCCAGTCCCCAGATGCTGGATGGCATTATGGTAGAATATTACGGCGCTCCCACCCCTTTGAGCCAGGTAGCCAACATATCCACACCCGATGCGCGCACGATCACCATCCAACCGTGGGAAAAAACGCTGATAGGACCTATTGAAAGAGGCATCATGATGGCCAATATAGGCCTTACGCCCCAGAACGACGGGCAGCTGATCCGGCTGTATCTTCCCCCGCTGACCGAGGAAAGAAGAAAGGAGCTGGTGAAACGGGTCAATACGGAAGGAGAGCAGGCGAAAGTAGTGGTAAGAAGCGCCAGGAGAGATGCCATTGAGGGCATCAAGAAGCTCCAGAAAGACGGCTTAAGCGAAGACGTGGCCAAAGGAGCGGAAGGAGATATCCAGAACAAAACAGATAAATTTATAACGAAGATCGATGAAAGGTGCAGGGATAAGGAAAAGGAAATTATGACCATCTAA
PROTEIN sequence
Length: 188
MSEQLDHIFSTTDLQMDKAVAHLDSELLKIRAGKASPQMLDGIMVEYYGAPTPLSQVANISTPDARTITIQPWEKTLIGPIERGIMMANIGLTPQNDGQLIRLYLPPLTEERRKELVKRVNTEGEQAKVVVRSARRDAIEGIKKLQKDGLSEDVAKGAEGDIQNKTDKFITKIDERCRDKEKEIMTI*