ggKbase home page

scnpilot_p_inoc_scaffold_453

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_453_1
unknown

Not on your lists

comp(3..656)
DNA (654bp) protein (218aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_453_2
unknown

Not on your lists

comp(672..1409)
DNA (738bp) protein (246aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_453_3
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1409..7333)
DNA (5925bp) protein (1975aa)
Putative uncharacterized protein id=2182765 bin=GWE2_Bacteroidetes_32_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_453_4
unknown

Not on your lists

comp(7363..7833)
DNA (471bp) protein (157aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_453_5
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7805..8296)
DNA (492bp) protein (164aa)
Molecular chaperone Skp {ECO:0000313|EMBL:GAL85757.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Outer membrane chaperone Skp (OmpH) id=2182761 bin=GWE2_Bacteroidetes_32_14 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
scnpilot_p_inoc_scaffold_453_6
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8303..9424)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EGR0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM35222.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BA
scnpilot_p_inoc_scaffold_453_7
unknown

Not on your lists

comp(9433..12162)
DNA (2730bp) protein (910aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_453_8
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12515..13753)
DNA (1239bp) protein (413aa)
Probable sigma-70 factor, ECF subfamily n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11S84_CYTH3 rbh
ECF subfamily RNA polymerase sigma-70 factor rbh
Probable sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ABG59730.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinson
scnpilot_p_inoc_scaffold_453_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13765..14070)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FU06_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EEI93636.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_453_10
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14096..14437)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11S85_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:CDS91457.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_453_11
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14771..15313
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3Y6H2_9FLAO
GCN5-like N-acetyltransferase Tax=CG_Flavo_01
hypothetical protein
scnpilot_p_inoc_scaffold_453_12
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15433..16236
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EDC6A
DNA alkylation repair protein
DNA alkylation repair protein {ECO:0000313|EMBL:AIM38381.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphi
scnpilot_p_inoc_scaffold_453_13
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16352..16876)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HZ57_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60842.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
hypothetical protein
scnpilot_p_inoc_scaffold_453_14
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16933..17511)
DNA (579bp) protein (193aa)
Putative Crp/Fnr family transcriptional regulator n=1 Tax=Imtechella halotolerans K1 RepID=I0W7F9_9FLAO
Putative Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EID72325.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" sourc
cyclic nucleotide-binding domain protein
scnpilot_p_inoc_scaffold_453_15
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18132..19343
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HHX1_9FLAO rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KFC22408.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" sourc
sulfide:quinone oxidoreductase
scnpilot_p_inoc_scaffold_453_16
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19435..19992
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RF73_CELLC
YeeE/YedE family protein {ECO:0000313|EMBL:KGO84541.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium be
YeeE/YedE family protein
scnpilot_p_inoc_scaffold_453_17
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20000..21328
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PRE5_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF54109.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_453_18
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21356..21772
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PNH5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54110.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_453_19
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21789..22427
DNA (639bp) protein (213aa)
Nitrogen-responsive regulatory protein n=1 Tax=Galbibacter marinus RepID=K2PZR0_9FLAO rbh
Nitrogen-responsive regulatory protein {ECO:0000313|EMBL:EKF54111.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbiba
Nitrogen-responsive regulatory protein
scnpilot_p_inoc_scaffold_453_20
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22432..23673
DNA (1242bp) protein (414aa)
MFS transporter n=1 Tax=Empedobacter brevis RepID=UPI00037A8A8D rbh
major facilitator family transporter Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
putative major facilitator family transporter
scnpilot_p_inoc_scaffold_453_21
unknown

Not on your lists

23913..24215
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_453_22
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

24278..25000
DNA (723bp) protein (241aa)
alpha-acetolactate decarboxylase; K01575 acetolactate decarboxylase [EC:4.1.1.5] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00035DB112
alpha-acetolactate decarboxylase AlsD
scnpilot_p_inoc_scaffold_453_23
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25262..26821
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PNK7_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KFF04331.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reic
hypothetical protein
scnpilot_p_inoc_scaffold_453_24
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27228..28037
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2PZR6_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF54116.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_453_25
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28038..28997
DNA (960bp) protein (320aa)
Putative membrane protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KAM5_HALHC
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGB41600.1}; Flags: Precursor;; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halo
scnpilot_p_inoc_scaffold_453_26
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29124..30542
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QH97_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF54117.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein rbh
scnpilot_p_inoc_scaffold_453_27
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30851..31498
DNA (648bp) protein (216aa)
Peroxiredoxin n=1 Tax=Galbibacter marinus RepID=K2PRF5_9FLAO rbh
Peroxiredoxin {ECO:0000313|EMBL:EKF54119.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
peroxiredoxin
scnpilot_p_inoc_scaffold_453_28
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31561..31875
DNA (315bp) protein (105aa)
Rhodanese-like domain-containing protein n=1 Tax=Galbibacter marinus RepID=K2PZS0_9FLAO
Rhodanese-like domain-containing protein {ECO:0000313|EMBL:EKF54121.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbi
Rhodanese-related sulfurtransferase
scnpilot_p_inoc_scaffold_453_29
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31889..32074
DNA (186bp) protein (62aa)
Methyltransferase family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRH6_SOLCM
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AFD07501.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea
scnpilot_p_inoc_scaffold_453_30
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32111..32512
DNA (402bp) protein (134aa)
Methyltransferase type 11 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5W1_SPHS2
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADZ80126.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingoba
Displaying items 1-30 of 76 in total

View Taxonomy