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scnpilot_p_inoc_scaffold_480

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_480_1
unknown

Not on your lists

comp(59..289)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_2
unknown

Not on your lists

comp(348..1124)
DNA (777bp) protein (259aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_3
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1282..1641)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Elizabethkingia meningoseptica RepID=R9CK15_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR29672.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia m
hypothetical protein
scnpilot_p_inoc_scaffold_480_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2231..3307)
DNA (1077bp) protein (359aa)
NUMOD4 motif protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTY7_SOLCM
NUMOD4 motif protein
NUMOD4 motif protein {ECO:0000313|EMBL:AFD06837.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis
scnpilot_p_inoc_scaffold_480_5
unknown

Not on your lists

3652..3765
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_6
unknown

Not on your lists

3845..4624
DNA (780bp) protein (260aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_7
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4756..5598)
DNA (843bp) protein (281aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G5U9_ECHVK rbh
Cupin {ECO:0000313|EMBL:KFF73850.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
scnpilot_p_inoc_scaffold_480_8
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5993..7033
DNA (1041bp) protein (347aa)
aldo/keto reductase n=1 Tax=Flavobacterium rivuli RepID=UPI0003644469 rbh
Aldo/keto reductase {ECO:0000313|EMBL:KGO93698.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxo
aldo/keto reductase
scnpilot_p_inoc_scaffold_480_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7348..8217
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MTV7_9SPHI
peroxidase
Peroxidase {ECO:0000313|EMBL:AHF16950.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_480_10
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8527..8886)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2IXD8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ57374.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
scnpilot_p_inoc_scaffold_480_11
unknown

Not on your lists

9013..9144
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


9725..11167
DNA (1443bp) protein (481aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL38_NIAKG
glycyl-tRNA synthetase
scnpilot_p_inoc_scaffold_480_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11303..12373)
DNA (1071bp) protein (357aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTV1_SOLCM
trypsin-like serine protease with C-terminal PDZ domain
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:AFD06801.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solital
scnpilot_p_inoc_scaffold_480_14
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12401..12985)
DNA (585bp) protein (195aa)
Sigma-70 region 2 domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZU69_9BACT
Sigma-70 region 2 domain protein {ECO:0000313|EMBL:EAY26040.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 2
RNA polymerase subunit sigma-70
scnpilot_p_inoc_scaffold_480_15
unknown

Not on your lists

13138..13353
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_16
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

13580..14143
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P2_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_p_inoc_scaffold_480_17
unknown

Not on your lists

14118..14471
DNA (354bp) protein (118aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_18
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14608..15159
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000378C88F
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KGE86358.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;"
ECF subfamily RNA polymerase sigma-24 subunit
scnpilot_p_inoc_scaffold_480_19
unknown

Not on your lists

15166..17115
DNA (1950bp) protein (650aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_20
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

17420..18163
DNA (744bp) protein (248aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB84_CHIPD
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
electron transfer flavoprotein alpha/beta-subunit
scnpilot_p_inoc_scaffold_480_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18228..19199
DNA (972bp) protein (324aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB83_CHIPD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACU61221.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" sourc
scnpilot_p_inoc_scaffold_480_22
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19787..21802)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J5E2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ95171.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
scnpilot_p_inoc_scaffold_480_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21920..23272
DNA (1353bp) protein (451aa)
Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GST7_9SPHI
Multidrug transporter MATE {ECO:0000313|EMBL:KIC91865.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumiba
multidrug transporter MATE
scnpilot_p_inoc_scaffold_480_24
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23331..23876
DNA (546bp) protein (182aa)
hypothetical protein
Putative uncharacterized protein id=2183320 bin=GWE2_Bacteroidetes_32_14 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_p_inoc_scaffold_480_25
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24262..24735)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2H8R4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ58101.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobac
DinB family protein
scnpilot_p_inoc_scaffold_480_26
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25029..26423)
DNA (1395bp) protein (465aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDH0_PEDSD
two component, sigma54 specific, transcriptional regulator, Fis family
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADY53953.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacter
scnpilot_p_inoc_scaffold_480_27
unknown

Not on your lists

comp(26519..26824)
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_480_28
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26998..29406)
DNA (2409bp) protein (803aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002E77DBB
Histidine kinase {ECO:0000313|EMBL:KIA91203.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis
multi-sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_480_29
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29513..30604
DNA (1092bp) protein (364aa)
12-oxophytodienoate reductase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C6D8_SPHS2 rbh
Strain DSM 12611 Contig16, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51370.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
12-oxophytodienoate reductase
scnpilot_p_inoc_scaffold_480_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30699..30965)
DNA (267bp) protein (89aa)
H+transporting two-sector ATPase delta/epsilon subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSM4_CHIPD
H+transporting two-sector ATPase aubunit delta/epsilon
H+transporting two-sector ATPase delta/epsilon subunit {ECO:0000313|EMBL:ACU64473.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophag
Displaying items 1-30 of 64 in total

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