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scnpilot_p_inoc_scaffold_609

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_609_31
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33549..34166
DNA (618bp) protein (206aa)
PRTRC system protein E n=1 Tax=Empedobacter brevis RepID=UPI0003632F4F rbh
Prtrc system protein e {ECO:0000313|EMBL:KEQ30226.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarc
prtrc system protein e
scnpilot_p_inoc_scaffold_609_32
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

34185..34403
DNA (219bp) protein (73aa)
PRTRC system protein C n=2 Tax=Bacteroidetes RepID=C2G274_9SPHI
PRTRC system protein C {ECO:0000313|EMBL:KEQ31070.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarc
PRTRC system protein C
scnpilot_p_inoc_scaffold_609_33
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34421..35566
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00036D7625 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO08732.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mi
hypothetical protein
scnpilot_p_inoc_scaffold_609_34
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35577..36302
DNA (726bp) protein (242aa)
PRTRC system protein B n=1 Tax=Empedobacter brevis RepID=UPI00036B2897 rbh
PRTRC system protein B {ECO:0000313|EMBL:KGO08731.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mir
PRTRC system protein B
scnpilot_p_inoc_scaffold_609_35
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36302..37111
DNA (810bp) protein (270aa)
thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Empedobacter brevis RepID=UPI000381B071 rbh
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:KGO08730.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabe
thiamine biosynthesis protein ThiF
scnpilot_p_inoc_scaffold_609_36
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37456..39531
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000365EC9E rbh
OLD family ATP-dependent endonuclease
Putative ATP-dependent endonuclease of the OLD family {ECO:0000313|EMBL:AGA69239.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source
scnpilot_p_inoc_scaffold_609_37
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39522..41210
DNA (1689bp) protein (563aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1246994 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabe
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000366A125 rbh
DNA/RNA helicase
scnpilot_p_inoc_scaffold_609_38
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41280..42272
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000372CDD0 rbh
uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:GAE64168.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
scnpilot_p_inoc_scaffold_609_39
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42439..43434
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003671FA3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF18841.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
ATPase
scnpilot_p_inoc_scaffold_609_40
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43442..43837)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000376CB3A
Uncharacterized protein {ECO:0000313|EMBL:EEI90754.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_609_41
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44112..44363)
DNA (252bp) protein (84aa)
DNA binding domain, excisionase family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0Q4_9FLAO
DNA binding domain, excisionase family {ECO:0000313|EMBL:EFK34053.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Ch
hypothetical protein
scnpilot_p_inoc_scaffold_609_42
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44392..44703)
DNA (312bp) protein (104aa)
DNA-binding protein n=1 Tax=Empedobacter brevis RepID=UPI00035CAAB3
Uncharacterized protein {ECO:0000313|EMBL:EFK56926.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
DNA-binding protein
scnpilot_p_inoc_scaffold_609_43
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44888..45367)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VQJ1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56042.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_609_44
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(45400..45867)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFI2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH52657.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_609_45
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(45926..46657)
DNA (732bp) protein (244aa)
Pirin family protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RRM9_LEAB4
pirin family protein
Pirin family protein {ECO:0000313|EMBL:ADQ16685.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain
scnpilot_p_inoc_scaffold_609_46
Myroides odoratimimus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

46820..47143
DNA (324bp) protein (108aa)
Transcriptional regulator, HxlR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGT3_RUNSL
HxlR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EHO11638.1}; TaxID=883154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratimimus CIP
scnpilot_p_inoc_scaffold_609_47
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47211..47660)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0P8_9FLAO
Conjugal transfer protein TraQ {ECO:0000313|EMBL:KGO08713.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethki
Conjugative transposon protein TraQ
scnpilot_p_inoc_scaffold_609_48
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(47673..48233)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2Y7_9FLAO
conjugal transfer protein TraO
Conjugal transfer protein TraO {ECO:0000313|EMBL:AIM37839.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
scnpilot_p_inoc_scaffold_609_49
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48254..49147)
DNA (894bp) protein (298aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00036F8AF9
conjugal transfer protein TrbN
Conjugal transfer protein TrbN {ECO:0000313|EMBL:AIM37840.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
scnpilot_p_inoc_scaffold_609_50
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49172..50512)
DNA (1341bp) protein (447aa)
conjugal transfer protein TraM n=1 Tax=Empedobacter brevis RepID=UPI00037DEEEA rbh
Conjugal transfer protein TraM {ECO:0000313|EMBL:KGO08710.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethki
conjugal transfer protein TraM
scnpilot_p_inoc_scaffold_609_51
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50499..50765)
DNA (267bp) protein (89aa)
nitrogen regulatory IIA protein n=1 Tax=Empedobacter brevis RepID=UPI0003672B20
Nitrogen regulatory IIA protein {ECO:0000313|EMBL:KGO08709.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethk
nitrogen regulatory IIA protein
scnpilot_p_inoc_scaffold_609_52
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50807..51238)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT33_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56934.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_609_53
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51249..51872)
DNA (624bp) protein (208aa)
Conjugative transposon TraK protein n=2 Tax=Bacteroidetes RepID=C2G249_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE65873.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
scnpilot_p_inoc_scaffold_609_54
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51895..52890)
DNA (996bp) protein (332aa)
TraJ family protein conjugative transposon n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTE6_LEAB4
Conjugal transfer protein {ECO:0000313|EMBL:KGO08706.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia
traj family protein conjugative transposon
scnpilot_p_inoc_scaffold_609_55
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52893..53525)
DNA (633bp) protein (211aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00036688B0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO08705.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia mi
traI2; conjugative transposon protein TraI
scnpilot_p_inoc_scaffold_609_56
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53553..56057)
DNA (2505bp) protein (835aa)
conjugate transposon protein n=1 Tax=Empedobacter brevis RepID=UPI00035E0248
conjugal transfer protein TraG
Conjugal transfer protein TraG {ECO:0000313|EMBL:AIM37847.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sph
scnpilot_p_inoc_scaffold_609_57
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56054..56383)
DNA (330bp) protein (110aa)
Conjugative transposon protein TraF n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0N8_9FLAO
Conjugative transposon protein TraF {ECO:0000313|EMBL:EFK34037.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chrys
hypothetical protein
scnpilot_p_inoc_scaffold_609_58
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56395..56700)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S619_PEDSD
hypothetical protein
Conjugative transposon protein TraE {ECO:0000313|EMBL:EFK56940.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source=
Displaying items 31-58 of 58 in total

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