ggKbase home page

scnpilot_p_inoc_scaffold_609_54

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(51895..52890)

Top 3 Functional Annotations

Value Algorithm Source
TraJ family protein conjugative transposon n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RTE6_LEAB4 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 331.0
  • Bit_score: 626
  • Evalue 2.00e-176
Conjugal transfer protein {ECO:0000313|EMBL:KGO08706.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 329.0
  • Bit_score: 627
  • Evalue 1.30e-176
traj family protein conjugative transposon similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 331.0
  • Bit_score: 626
  • Evalue 5.80e-177

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Elizabethkingia miricola → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 996
ATGGAATGGAATAATCTTCACGAAGTCCTGCGTTCGCTGTATGATGATATGATGCCGCTTGCCGGAGATATGGCAGCAGTGGCAAAAGGACTGGCGGGATTGGGTGCATTGTTCTATGTGGCATTAAAGGTTTGGCAGGCTTTAAGCCGTGCCGAACCTATTGATGTGTTTCCGTTGCTCCGCCCCTTTGCATTAGGTCTGTGCATTATGTTCTTCCCAACCATCGTGTTGGGAACCATCAATGCGGTGTTAAGTCCCGTGGTTACAGGAACACACGCCATACTCGAAGACCAGGTACTTGACCTTAATATACTGCAACAGCAGAAAGACCAATTGGAATACGAAGCAATGGTCAGAAATCCCGAAACTGCCTATATGGTATCGGACGAAGAGTTCGATAAAAAGCTGGATGAATTGGGATGGTCACCCTCCGATATTGGAACAATGGCAGGAATGTATATGGACAGGACAGGCTATCAGATAGAAAAAGCTATAAAGGACTGGTTTCGTAATCTGCTGGAAATACTGTTTCAGGCAGCAGCTCTGGTAATTGATACGATACGGACGTTTTTTCTGATAGTCCTTTCCATACTCGGACCAATAGCCTTTGCCATTTCTGTGTGGGATGGGTTTCAGTCCACGCTCACGCAATGGCTCACGAGGTATATAAGTGTTTACCTCTGGCTACCTGTTTCAGACCTGTTCAGCTCAATGCTTGCAAGAATACAATCGCTTATACTGGAAAGGGATATTGAAATGCTGGCAGATCCGACATACATACCTGATACCTCAAATACGGTGTACATCATTTTTATGATCATCGGGATTATCGGCTATTTCACCATTCCAACGGTAACAGGCTGGGTTATACAGGCAGGCGGAGCAGGAAACTTTACACGCAATGTAAACCAAACAGCGATGAAAACCGGAAATATTGCCGGAGCCGGAGCCGGTTCAGCCGCAGGGAATATTGGTGGCAAGCTAATGGGAAAATAA
PROTEIN sequence
Length: 332
MEWNNLHEVLRSLYDDMMPLAGDMAAVAKGLAGLGALFYVALKVWQALSRAEPIDVFPLLRPFALGLCIMFFPTIVLGTINAVLSPVVTGTHAILEDQVLDLNILQQQKDQLEYEAMVRNPETAYMVSDEEFDKKLDELGWSPSDIGTMAGMYMDRTGYQIEKAIKDWFRNLLEILFQAAALVIDTIRTFFLIVLSILGPIAFAISVWDGFQSTLTQWLTRYISVYLWLPVSDLFSSMLARIQSLILERDIEMLADPTYIPDTSNTVYIIFMIIGIIGYFTIPTVTGWVIQAGGAGNFTRNVNQTAMKTGNIAGAGAGSAAGNIGGKLMGK*