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scnpilot_p_inoc_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_802_1
unknown

Not on your lists

1..84
DNA (84bp) protein (28aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_802_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

296..2647
DNA (2352bp) protein (784aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GQE1_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH56119.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
scnpilot_p_inoc_scaffold_802_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2663..3499
DNA (837bp) protein (279aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL85002.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
scnpilot_p_inoc_scaffold_802_4
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3785..5077
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassal
Sensor protein RprX n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JQR7_9BACT rbh
integral membrane sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_802_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5110..5805
DNA (696bp) protein (232aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP43_CHIPD
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU58740.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chiti
scnpilot_p_inoc_scaffold_802_6
Idiomarina baltica, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5846..6355
DNA (510bp) protein (170aa)
Outer membrane protein and related peptidoglycan-associated(Lipo)proteins n=1 Tax=Idiomarina baltica OS145 RepID=A3WK59_9GAMM
Outer membrane protein and related peptidoglycan-associated(Lipo)proteins {ECO:0000313|EMBL:EAQ32769.1}; TaxID=314276 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarin
OmpA family protein
scnpilot_p_inoc_scaffold_802_7
unknown

Not on your lists

comp(6435..7139)
DNA (705bp) protein (235aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_802_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7146..7532)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NK49_9SPHI
membrane protein
Membrane protein {ECO:0000313|EMBL:AHF14025.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
scnpilot_p_inoc_scaffold_802_9
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7525..8058)
DNA (534bp) protein (178aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingob
Shikimate kinase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C7T3_SPHS2
shikimate kinase
scnpilot_p_inoc_scaffold_802_10
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8055..8855)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003782CF7
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFL85658.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;"
scnpilot_p_inoc_scaffold_802_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8948..9442
DNA (495bp) protein (165aa)
Phosphoribosyltransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE94_CHIPD
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACU63303.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pin
scnpilot_p_inoc_scaffold_802_12
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9575..9847
DNA (273bp) protein (91aa)
Putative membrane protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CL91_9FLAO
Putative membrane protein {ECO:0000313|EMBL:EJL73869.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacteri
transglycosylase
scnpilot_p_inoc_scaffold_802_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10269..11060)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS38_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC93750.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_802_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(11297..12043)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKA7_NIAKG
hypothetical protein; K02066 putative ABC transport system permease protein Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
hypothetical protein
scnpilot_p_inoc_scaffold_802_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12194..14086
DNA (1893bp) protein (631aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIF1_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:KJS06916.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
PKD domain-containing protein
scnpilot_p_inoc_scaffold_802_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14177..15844)
DNA (1668bp) protein (556aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=1220578 species="Bac
UPF0747 protein Cpin_4721 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLU4_CHIPD
hypothetical protein
scnpilot_p_inoc_scaffold_802_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15917..18073
DNA (2157bp) protein (719aa)
Dipeptidyl-peptidase IV {ECO:0000313|EMBL:AEE51300.1}; EC=3.4.14.5 {ECO:0000313|EMBL:AEE51300.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae;
Dipeptidyl-peptidase IV n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVI7_HALH1
dipeptidyl-peptidase IV
scnpilot_p_inoc_scaffold_802_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18088..19881
DNA (1794bp) protein (598aa)
Surface antigen (D15) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMQ1_NIAKG
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEW03072.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (st
scnpilot_p_inoc_scaffold_802_19
unknown

Not on your lists

20008..20730
DNA (723bp) protein (241aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_802_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20740..22515)
DNA (1776bp) protein (592aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD sub
Exodeoxyribonuclease V, alpha subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDT2_CHIPD rbh
exodeoxyribonuclease V subunit alpha
scnpilot_p_inoc_scaffold_802_21
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22577..23350)
DNA (774bp) protein (258aa)
rfbF; putative glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Probable glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CCB68859.1}; EC=2.7.7.33 {ECO:0000313|EMBL:CCB68859.1};; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacter
Probable glucose-1-phosphate cytidylyltransferase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z6L7_FLABF rbh
scnpilot_p_inoc_scaffold_802_22
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23463..24485)
DNA (1023bp) protein (341aa)
Adenine-specific DNA methylase n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R5P8_RIEAN rbh
site-specific DNA-methyltransferase (adenine-specific)
Adenine-specific DNA methylase {ECO:0000313|EMBL:AFR35778.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anat
scnpilot_p_inoc_scaffold_802_23
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24470..25075)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WZB6_NITSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV46628.1}; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Nitratifractor.;" source="Nitratifractor salsuginis (st
scnpilot_p_inoc_scaffold_802_24
Shewanella sp. ANA-3, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25240..25683
DNA (444bp) protein (148aa)
Lipoprotein n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KV04_SHESA
lipoprotein
Lipoprotein {ECO:0000313|EMBL:ABK47623.1}; TaxID=94122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain ANA-3).;"
scnpilot_p_inoc_scaffold_802_25
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25852..26397)
DNA (546bp) protein (182aa)
Lipocalin-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8B9_9FLAO
Lipocalin-like protein {ECO:0000313|EMBL:EFK35815.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium g
blc2; lipoprotein Blc
scnpilot_p_inoc_scaffold_802_26
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27220..28749)
DNA (1530bp) protein (510aa)
Putative uncharacterized protein id=4852762 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Putative uncharacterized protein Tax=GWA2_Bacteroidetes_32_17_curated
scnpilot_p_inoc_scaffold_802_27
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28946..30199)
DNA (1254bp) protein (418aa)
Glucose sorbosone dehydrogenase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GLE5_9BACT
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:CCH54721.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
glucose sorbosone dehydrogenase
scnpilot_p_inoc_scaffold_802_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30290..32539)
DNA (2250bp) protein (750aa)
Coagulation factor 5/8 type domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF15_CHIPD">RepID=C7PF15_CHIPD rbh
coagulation factor 5/8 type domain-containing protein rbh
Coagulation factor 5/8 type domain protein {ECO:0000313|EMBL:ACU59742.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chit
scnpilot_p_inoc_scaffold_802_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32552..35419)
DNA (2868bp) protein (956aa)
TPR repeat-containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF16_CHIPD">RepID=C7PF16_CHIPD rbh
hypothetical protein rbh
TPR repeat-containing protein {ECO:0000313|EMBL:ACU59743.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" s
scnpilot_p_inoc_scaffold_802_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35454..36887)
DNA (1434bp) protein (478aa)
Glycosyl transferase family 2 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF17_CHIPD">RepID=C7PF17_CHIPD rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU59744.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga
Displaying items 1-30 of 34 in total

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