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scnpilot_p_inoc_scaffold_1576

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1576_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(775..1143)
DNA (369bp) protein (123aa)
50S ribosomal protein L7 n=1 Tax=Niabella aurantiaca RepID=UPI000379EB9C
50S ribosomal protein L7
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli
scnpilot_p_inoc_scaffold_1576_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1258..1818)
DNA (561bp) protein (187aa)
50S ribosomal protein L10 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG4_CHIPD
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|RuleBase:RU003636, ECO:0000256|SAAS:SAAS00104918}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitino
scnpilot_p_inoc_scaffold_1576_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1892..2587)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG3_CHIPD
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi
rplA; 50S ribosomal protein L1
scnpilot_p_inoc_scaffold_1576_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(2632..3075)
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Niabella aurantiaca RepID=UPI000372BDFE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flav
50S ribosomal protein L11
scnpilot_p_inoc_scaffold_1576_5
unknown

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comp(3434..4174)
DNA (741bp) protein (247aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1576_6
Flavobacteriales bacterium ALC-1, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4424..5812)
DNA (1389bp) protein (463aa)
TonB n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UHP0_9FLAO
TonB {ECO:0000313|EMBL:EDP71656.1}; TaxID=391603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium ALC-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1576_7
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5809..6174)
DNA (366bp) protein (122aa)
transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00035E5E72
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDS93970.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingoba
scnpilot_p_inoc_scaffold_1576_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6320..7681)
DNA (1362bp) protein (454aa)
Peptidase M20 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRL1_CHIPD
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ACU58904.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strai
scnpilot_p_inoc_scaffold_1576_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7751..8515)
DNA (765bp) protein (255aa)
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI0003797D52
Acyl-phosphate glycerol 3-phosphate acyltransferase {ECO:0000313|EMBL:KIC92727.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibact
1-acylglycerol-3-phosphate O-acyltransferase
scnpilot_p_inoc_scaffold_1576_10
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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8863..9699
DNA (837bp) protein (279aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A8DVL2_NEMVE rbh
Predicted protein {ECO:0000313|EMBL:EDO25747.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (St
MotA/TolQ/ExbB proton channel
scnpilot_p_inoc_scaffold_1576_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9825..10505
DNA (681bp) protein (227aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRN1_CHIPD
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACU58924.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
scnpilot_p_inoc_scaffold_1576_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10545..11087
DNA (543bp) protein (181aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRN2_CHIPD
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACU58925.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
scnpilot_p_inoc_scaffold_1576_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11141..11968
DNA (828bp) protein (276aa)
TonB family protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFD0_9SPHI
TonB family protein {ECO:0000313|EMBL:EHQ27238.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacte
TonB family protein
scnpilot_p_inoc_scaffold_1576_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12456..13724)
DNA (1269bp) protein (423aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chit
Isocitrate dehydrogenase [NADP] n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM90_CHIPD rbh
isocitrate dehydrogenase
scnpilot_p_inoc_scaffold_1576_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13922..14896
DNA (975bp) protein (325aa)
Mammalian cell entry related domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEY4_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KIC91929.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_1576_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14928..15584
DNA (657bp) protein (219aa)
uracil phosphoribosyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI000372CAFF
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:GAO41618.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavi
uracil phosphoribosyltransferase
scnpilot_p_inoc_scaffold_1576_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15726..16769
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNZ5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58692.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
scnpilot_p_inoc_scaffold_1576_18
unknown

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16789..16917
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1576_19
unknown

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comp(16874..16966)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1576_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17013..17966
DNA (954bp) protein (318aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
Methylenetetrahydrofolate reductase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PK24_CHIPD
methylenetetrahydrofolate reductase
scnpilot_p_inoc_scaffold_1576_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18020..18259
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95155.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
scnpilot_p_inoc_scaffold_1576_22
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18313..18870)
DNA (558bp) protein (186aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G5M1_ECHVK
methionine-S-sulfoxide reductase
scnpilot_p_inoc_scaffold_1576_23
unknown

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comp(19889..21226)
DNA (1338bp) protein (446aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1576_24
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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comp(21273..21506)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037B182A
PDK repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
PKD domain-containing protein
scnpilot_p_inoc_scaffold_1576_25
unknown

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21532..21708
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1576_26
unknown

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21751..21999
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 26 items

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