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scnpilot_p_inoc_scaffold_92_113

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(138555..139244)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QEL1_SPILD similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 243.0
  • Bit_score: 243
  • Evalue 2.60e-61
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 229.0
  • Bit_score: 243
  • Evalue 7.30e-62
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEI49107.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 229.0
  • Bit_score: 243
  • Evalue 3.60e-61

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 690
ATGATAAAAGCGATAGCAGTAGATGATGAGCCGCTGGCGCTAAAGGTGATCAGCAATTTTTGCCACCAGCATCCGGATATCCTGCTGGCTGCCACCTTTACGCGGACGGACAAAGCGCTGGAATTTATAGCGCAGCACCCCCCCGACCTGCTGTTCCTGGATATCCAGATGCCTAAAATAACAGGCATAGAGCTGCTTCATAAGATATCCCCCGCTCCCATGGTGATTTTTACGACCGCCTACAGTGAATATGCCGTAGAGGGCTTTGCGCTCAACGCGGTAGATTATCTGCTGAAGCCTTTTACAAAGGAACGTTTTGAACAGGCCGTTCAGAAAGCAAAGATTTGGGTCAGGGCGCAGGAAGGGGCATACGATGCTGCCTATCTTCTGCTGAAGGCCGATTACGGCATAGTGAGGGTATATATGAAGGACATAACATATATAGAAGGATGGGATGATTATGTGAAGATCCATATCCCGGGGCAGAAGCCGCTTGTTATCCGCATTACCATGAAAGCCTTGCTGGAGCGGCTGCCAGAGACCTCCTTTATACGTGTGCACCGTTCCTATATCGTCGCCCTGGATAAGATAGACCAGGTAAGGAACAGGGTGATCAGGATCGGCGATGCCCGGATCGCCATAGGCAGCAGCTTTGAAGAATCGTTTTTCAGGCGGTTCGGTAAGCCCTGA
PROTEIN sequence
Length: 230
MIKAIAVDDEPLALKVISNFCHQHPDILLAATFTRTDKALEFIAQHPPDLLFLDIQMPKITGIELLHKISPAPMVIFTTAYSEYAVEGFALNAVDYLLKPFTKERFEQAVQKAKIWVRAQEGAYDAAYLLLKADYGIVRVYMKDITYIEGWDDYVKIHIPGQKPLVIRITMKALLERLPETSFIRVHRSYIVALDKIDQVRNRVIRIGDARIAIGSSFEESFFRRFGKP*