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scnpilot_p_inoc_scaffold_33_170

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 219750..220355

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU97_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 201.0
  • Bit_score: 305
  • Evalue 4.90e-80
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumi similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 201.0
  • Bit_score: 306
  • Evalue 3.10e-80
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 201.0
  • Bit_score: 305
  • Evalue 1.40e-80

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGCACGTTATACTGGCCCTAAAAACAAGATCAACCGTATTTTCGGCGAACCTATCCTGGGTTCCGGCAAAAACCTTTCAAAGAACAGCAATCCTCCGGGTATGCACGGTGCCAACCGCAAGCGTAAATCCCAGTCCGAGTATGCTATTCAGCTGAAAGAAAAACAAAAAGCAAAATATACTTACCTGGTCCTGGAAAAGCAATTCAGGAACACTTACCAGGAAGCTTCCCGTCGTAAAGGTGCAACAGGTACCAACCTGATCCAGCTGCTGGAAGCCCGCCTGGATAACTCCGTTTTCCGCGCAGGTCTGGCTCCTACCCGTTCCGCTGCCCGTCAGCTGGTGTCGCACAAGCACATCCTGGTGAACGGCGAGATCGTTAACATCCCTTCCTACAGCCTGAAGCCGGGTGACGTGATCGAGTTCAAAGCCAAATCCAAAGCAAACAACGCCGTGCTGGGTCTGGTAAAAGGTAAAAATCCTAATATCAACTGGATGGAATACAATGAAAAAGAATTGAAAGGTACTTTCCTTGCTTATCCTGAACGTGAAGCGGTTCCTGAAAATATCAAGGAACAATTAATCGTTGAATTGTATTCCAAATAA
PROTEIN sequence
Length: 202
MARYTGPKNKINRIFGEPILGSGKNLSKNSNPPGMHGANRKRKSQSEYAIQLKEKQKAKYTYLVLEKQFRNTYQEASRRKGATGTNLIQLLEARLDNSVFRAGLAPTRSAARQLVSHKHILVNGEIVNIPSYSLKPGDVIEFKAKSKANNAVLGLVKGKNPNINWMEYNEKELKGTFLAYPEREAVPENIKEQLIVELYSK*