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scnpilot_p_inoc_scaffold_33_171

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 220424..221422

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 332.0
  • Bit_score: 510
  • Evalue 1.80e-141
DNA-directed RNA polymerase subunit alpha n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU98_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 331.0
  • Bit_score: 510
  • Evalue 1.60e-141
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 331.0
  • Bit_score: 510
  • Evalue 4.60e-142

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 999
ATGGCTATATTAAGTTTCCAAAAACCGGATAAAATTGTGTTGCAGAAAGCAAACGATTTTGAGGCACAATTTGAATTCCGTCCATTAGAGCCAGGATATGGTGTAACCATTGGTAACGCTTTACGCAGAGTACTGTTGTCTTCTTTGGAAGGCCATGCCATTACAGGTATCCGCATCTCCGGGGTAGATCACGAGTTTGCCACCATTAAAGGAGTGCTGGAGGATGTGACTGAGATCATCCTCAACCTGAAACAGGTACGTTTGAAAAAACGCGGTGACGATGATATCCACAATGAGAAGATCGAACTGGTTATCAAAGGTCAGGAGCAGTTTTTAGCAGGCCAGATCGGGGAAGCGAGTACCGTGTTCGATGTTATGAACCCGGAGCAGCTGATCTGCAACCTTGATACAAGTGCTACTTTAGAGATTGAAATGGTGATCGGAAAAGGCCGCGGATATGTGCCTTCTGAAGAGAACCGCCCTAAAGACGCACCGGTAAACTTCATAGCTATTGATTCTATCTTCACACCTATCAAAAACGTAAAATATACGGTTGAAAATACGCGTGTGGAGCAGCGCACAGACTATGAAAAGCTGATCATGGAAGTGGTCACTGACGGAACGATCCACCCGGAGGAAGCCGTGAAGGAAGCGTCCCGTATCCTGATCCAGCACCTGATGATCATCACTGATGAAAATATCGCGCTGGATACCAAACGTGAAGAGAAAGAAGAAGCCGTTGACGAAGGTATGCTGCAGCTGAGAAAAGTGCTGAACACACCGCTGGAAGACCTCGAGCTTTCCGTACGTGCGTTCAATTGCCTGAAAGCAGCGAAGATCAACTCCCTGGTAGAGCTGGTTCAGTACACCCAGGATGAGCTGATGAAATTCCGCAACTTCGGCCAGAAATCATTAACAGAGATCGAGCAGGTATTACATGAAAGGAACCTCAGTTTCGGAATGGATATCAGCCGTATCAAATTCAGCGACGAAAACTGA
PROTEIN sequence
Length: 333
MAILSFQKPDKIVLQKANDFEAQFEFRPLEPGYGVTIGNALRRVLLSSLEGHAITGIRISGVDHEFATIKGVLEDVTEIILNLKQVRLKKRGDDDIHNEKIELVIKGQEQFLAGQIGEASTVFDVMNPEQLICNLDTSATLEIEMVIGKGRGYVPSEENRPKDAPVNFIAIDSIFTPIKNVKYTVENTRVEQRTDYEKLIMEVVTDGTIHPEEAVKEASRILIQHLMIITDENIALDTKREEKEEAVDEGMLQLRKVLNTPLEDLELSVRAFNCLKAAKINSLVELVQYTQDELMKFRNFGQKSLTEIEQVLHERNLSFGMDISRIKFSDEN*