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scnpilot_p_inoc_scaffold_33_270

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(343940..344803)

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Empedobacter brevis RepID=UPI00037FBE81 similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 287.0
  • Bit_score: 451
  • Evalue 4.60e-124
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EOR29704.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Eli similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 287.0
  • Bit_score: 450
  • Evalue 1.90e-123
High-affinity choline uptake protein BetT similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 287.0
  • Bit_score: 440
  • Evalue 3.90e-121

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Taxonomy

Elizabethkingia meningoseptica → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
TTGAGCCGGCTTTCCGGCAGCCCGGACGCATTACTGTTCCGCTTCCTCGAATATTTTCCCCTGACTGAAATCGCCAGCTTTTCAAGCATCGCAATCATCATTATCTTTTTTATAACCTCTGCCGATTCGGGCATGTTCGTCATGAACAATATTGCCACTAAGAACGCCCGGATCTCTCCAAAATGGCAGACGATCGGCTGGGGTATTTTACTGGCTGTGCTGGCATTGCTATTGCTGAACGCGGGAGGGCTTACCGCTTTACAAAGCATGACGCTGATCACGGCGCTGCCGTTCTCTGTCATCAGGCTGCTGTTCATTGTAAGCCTGGTAAAGGCCTTGTCTATTGACATCAGCTATTATGAGCGTGATTTTTCAGCGACTACCATACCGTGGTCAGGAGAATTCTGGAAAGAACGCTTAAAACAGATCATCTCTTTCCATGATCGTAAGTCCGTTAATAATTTTATAGACACAACCGTGAAGGATGCCTTTACAGAGCTGAAAGAAGAATTTTTAAGAAACGGGATCGAAGCTGACATCCATTCTTACGGGAAGCCGCACAGGATAGAGGTCGAAATTAAATATGATAAGGTGAACAACTTTTTGTACGGCGTCAGGAATGAATTAAGGATAGTGTCCGATTACCTGCTCCGGGAGGACAACCTGCCCAATATCGAGGATAACCGGACATTTTACCCGAAATCCTATTTTGGCGATGACCGGGAGGGCTACGATGTTCAGCTTTTCACAAAGAATGAATTGATATCAGATGTGCTTAAGCATTACGAACGATTCATTGAAATTATATCCGAAGAGCGCAATGAGATGTTCATCAGCAGCAATGCCAACCAAAGATTAAAGTAA
PROTEIN sequence
Length: 288
LSRLSGSPDALLFRFLEYFPLTEIASFSSIAIIIIFFITSADSGMFVMNNIATKNARISPKWQTIGWGILLAVLALLLLNAGGLTALQSMTLITALPFSVIRLLFIVSLVKALSIDISYYERDFSATTIPWSGEFWKERLKQIISFHDRKSVNNFIDTTVKDAFTELKEEFLRNGIEADIHSYGKPHRIEVEIKYDKVNNFLYGVRNELRIVSDYLLREDNLPNIEDNRTFYPKSYFGDDREGYDVQLFTKNELISDVLKHYERFIEIISEERNEMFISSNANQRLK*