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scnpilot_p_inoc_scaffold_33_271

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(344831..345955)

Top 3 Functional Annotations

Value Algorithm Source
Choline/carnitine/betaine transporter n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CK16_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 374.0
  • Bit_score: 663
  • Evalue 1.00e-187
  • rbh
Choline/carnitine/betaine transporter {ECO:0000313|EMBL:EOR29704.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Eli similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 374.0
  • Bit_score: 663
  • Evalue 1.40e-187
High-affinity choline uptake protein BetT similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 374.0
  • Bit_score: 649
  • Evalue 4.20e-184

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Taxonomy

Elizabethkingia meningoseptica → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1125
ATGATAAAATTACCCAAAATAAGAAATACGCTCAGCAAAGCCGTAGTCTTACCAAGTCTGATTTTTATTGTAGGCATTTGTTTACTGGCTGCCGTTTATCCGACATTCACGGAAAGCCTGCTCAACAGCGTCAAAAACTTCATATTCGTAAACCTGAACTGGATCTACGTCTGGTCCGTAACGATCTTTGTCCTGTTCCTGGTTTACCTGATGTTCAGCAAATACGGCAATATCCGCCTGGGAAGGAATAACAGCAAGCCGCAGTATTCTTTCTTTTCATGGATTTCGATGCTGTTCGCTGCCGGTATGGGGATCGGGCTAATGTATTTCAGCGTCGCAGAACCGATGCAGCACTACTCTGACGCAATATTTTCGGGAAATACAGCCGTTCAGCGTGCCAAGGACGCACAGCTTTACACTTTCTTTCACTGGGGTATCCACGCCTGGGCGATCTACGGGATCGTAGGGCTATCTCTGGCATACTTTTCCTATCGCTACCGCCTGCCGCTTTCGCTGCGAAGCTGTTTCTATCCTTTGCTGAAAGACAGGATCAAAGGCAGGTGGGGCAATACCATTGATGTATTCGCTCTTTGCAGCACCTTTTTCGGGATCACCACAACACTGGGCTTCGGCGTGGTGCAGATCAACTCCGGGCTGGAGACATTGAATGTCCTGCCGGGAAGCAATTTCCTGTACCAGGTATTGATCGTAGGCGTGCTGGTTTCGCTTTCCGTGCTCTCTGCCGTAAGCGGCGTAGACAAGGGCATCAGGATATTAAGCAACATCAATATCATAACTGTTATGCTGCTCCTGTTGTTTGTGCTGCTCTTCGGACCTACCGTTTACCTGATCGGGAGCTTTACCGAAGGCATCGGGAATTATATCAATAATTTTTTCAACCTGACATTCAACACGCACGTGTATGAAGCGGATACGCAGCCATGGTTCTATGACTGGACAATATTGTATTGGGCCTGGTGGATCTCCTGGTCGCCTTATGTAGGCCTGTTCATCGCAAGGATATCCAAAGGAAGAACGATACGGGAGTTTATAGCGGCTGTTCTGATCATCCCCACTTTGTTCAATTTCATCTGGATGTCGGTTTTCGGTAACAGCGCCATATAG
PROTEIN sequence
Length: 375
MIKLPKIRNTLSKAVVLPSLIFIVGICLLAAVYPTFTESLLNSVKNFIFVNLNWIYVWSVTIFVLFLVYLMFSKYGNIRLGRNNSKPQYSFFSWISMLFAAGMGIGLMYFSVAEPMQHYSDAIFSGNTAVQRAKDAQLYTFFHWGIHAWAIYGIVGLSLAYFSYRYRLPLSLRSCFYPLLKDRIKGRWGNTIDVFALCSTFFGITTTLGFGVVQINSGLETLNVLPGSNFLYQVLIVGVLVSLSVLSAVSGVDKGIRILSNINIITVMLLLLFVLLFGPTVYLIGSFTEGIGNYINNFFNLTFNTHVYEADTQPWFYDWTILYWAWWISWSPYVGLFIARISKGRTIREFIAAVLIIPTLFNFIWMSVFGNSAI*