ggKbase home page

scnpilot_p_inoc_scaffold_480_63

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 69614..71599

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU64_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 597.0
  • Bit_score: 275
  • Evalue 1.80e-70
collagen triple helix repeat protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 577.0
  • Bit_score: 279
  • Evalue 1.70e-71
collagen triple helix repeat domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 34.2
  • Coverage: 600.0
  • Bit_score: 272
  • Evalue 4.20e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1986
ATGAAAACGAATTACATACTGGCCGGTGCGCTGTTGCTGGCCACCAGTACGGCAGCAGTTGCGCAGTCACAGAAATTCAATTACCAGGGGATAGCTCGGGCTGCTTCAGGACAGCCATTGGCCAATCAGCAACTGGGATTACGTATCACCATTATTGAAGGGACGGCTAACGGTACGTCTCTGTATGTAGAATCCCATACTACAACTACCAATGCCTACGGACTTTACACGCTTGCCGTTGGCGGCGGTACTCCTATTTCAGGCGATATGACCGCCATCAACTGGGGCAACAGCGACAAGTTCATTAAAGTGGAAATAGATCCTGCCGGCGGTACGAACTATACAAGTCTCGGTACCAATGAATTGCTGAGCGTTCCGTTCGCGATGTACGCTATGAACAGCGCATCCGGCCCGATAGGTCCTCAGGGCCCTGCAGGTCCGCAAGGACCGGCGGGACCGGCAGGACCAGCGGGTGCACAAGGACCTATCGGTAACACGGGACCGGCAGGCCCTACAGGACCGGCGGGACCAGCAGGACCTATCGGTAACACGGGTCCGGCAGGCCCTACAGGACCGGCGGGACCAGCAGGGCCTATCGGTAATACAGGTCCGGCAGGGCCAGCGGGACCAGCGGGTCCGCAAGGACCTATCGGTAATACAGGGCCGGCAGGACCAGCAGGACCGGCAGGGGCACAAGGACCTATCGGTAATACAGGGCCGGCAGGACCAGCAGGGCCGGCGGGACCACAGGGACCACAAGGCCCTCCGGGCAGCGGCAGCATTAACGGTACCGCCAATTATCTTATCAAGTTTACCGGTGCGAATACCGGTGGTAATTCTATCGTTTCGGAAGGTACCAATGTGCTGAATATAGGCTCCAGCACTGCCGGGGCCGGTGTCAATTTCTATGGTAACGGTACGCAGTCTTCCCACCGTATCTATGAGGGCAGCAACAACCTCGGCTATTTCGGTTCGTTCTCCGGAGCAGCCAACGATGTGGATTTCGGTACTTCTGCCGGATCCAATGCCAGCCTGCACCTGACCACCCAGACCAATCCAAGACTGACAGTTACCAATAACGGCAATATAGGTATCGGCATCACTACACCTGAAGCTAAATTCCACGTGAATGGCTCACAAAATGCCAACCTCAATGTCAACGGTTTACCTTTCGGACACCAAGCCGGGGCCTTTGTCACTTCTGCAACAGCTACGGATTCCGTCTCCAGGGGTCTGGTTGCCATAGCGAATAACAGCAATGTTGAATCCCAGGGTATCTTTGCCTTAGGTTTTAACAGTGTTGCGACCGGGGCGGCTGTCGGCGGTTTCTTTATGGGCTATGATGCAACTCAGCAAAGCACAGGTATCGGTATCTTTGCCAATGCACCTTCCGGGGATGACCGCTGGGGCGTATATGGCACCGCCGGTAATAGCTCCACTTCCTGGCACTACGCGGGTGTCTTTAACGGTCATGCTATCGTTACAGGCAACTTATCCAAAGGAGCCGGAACATTCCAGATAGACCACCCTTTAGATCCGGAAAATAAATACCTGTACCACAGCTTTGTGGAAAGTCCTGATATGATGAACGTATACAACGGTAATATACAGACAGATGCCAATGGCTATGCGACCATTACACTGCCTAATTATTTTAATGCGCTGAACAGCGATTACCGTTACCAGCTAACACCTATCGGTGCGCTGGCACAGGCAGCGGTTATTGATGAGATCAGCGGCAATACCTTCAGGATACAGACCAGCGTTCCGAATATAAAAGTAAGCTGGCAGGTAACAGGTATCAGGAAAGATAAATATGCTGAAGCTAACAGGGTACAGCCTGAGGTTGAAAAAAGAGATAAAGATAAAGGTTACTACCTGCATCCGGAAGTATATGGCTTGCCAAAAGAAAAAGGTATCTTCTACAAGAATACGCCTAAAGCAGCAAAAGATCCTGCATCCGACAGTAGTGCGGTAAAAAAATAA
PROTEIN sequence
Length: 662
MKTNYILAGALLLATSTAAVAQSQKFNYQGIARAASGQPLANQQLGLRITIIEGTANGTSLYVESHTTTTNAYGLYTLAVGGGTPISGDMTAINWGNSDKFIKVEIDPAGGTNYTSLGTNELLSVPFAMYAMNSASGPIGPQGPAGPQGPAGPAGPAGAQGPIGNTGPAGPTGPAGPAGPIGNTGPAGPTGPAGPAGPIGNTGPAGPAGPAGPQGPIGNTGPAGPAGPAGAQGPIGNTGPAGPAGPAGPQGPQGPPGSGSINGTANYLIKFTGANTGGNSIVSEGTNVLNIGSSTAGAGVNFYGNGTQSSHRIYEGSNNLGYFGSFSGAANDVDFGTSAGSNASLHLTTQTNPRLTVTNNGNIGIGITTPEAKFHVNGSQNANLNVNGLPFGHQAGAFVTSATATDSVSRGLVAIANNSNVESQGIFALGFNSVATGAAVGGFFMGYDATQQSTGIGIFANAPSGDDRWGVYGTAGNSSTSWHYAGVFNGHAIVTGNLSKGAGTFQIDHPLDPENKYLYHSFVESPDMMNVYNGNIQTDANGYATITLPNYFNALNSDYRYQLTPIGALAQAAVIDEISGNTFRIQTSVPNIKVSWQVTGIRKDKYAEANRVQPEVEKRDKDKGYYLHPEVYGLPKEKGIFYKNTPKAAKDPASDSSAVKK*