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scnpilot_p_inoc_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 350 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_20_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(635..1531)
DNA (897bp) protein (299aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=694427 species="Bacteria; Bacteroidete
Riboflavin biosynthesis protein RibF n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T842_PALPW rbh
riboflavin biosynthesis protein ribf
scnpilot_p_inoc_scaffold_20_2
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1532..2173)
DNA (642bp) protein (214aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T843_PALPW
had-superfamily hydrolase, subfamily ia, variant 3; K07025 putative hydrolase of the HAD superfamily Tax=CG_Paludi_01
HAD-superfamily hydrolase
scnpilot_p_inoc_scaffold_20_3
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2625..3980
DNA (1356bp) protein (452aa)
Tat pathway signal sequence domain protein id=1995879 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes rbh
Uncharacterized protein {ECO:0000313|EMBL:CCX76962.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source=
oxidoreductase domain-containing protein
scnpilot_p_inoc_scaffold_20_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4005..5711
DNA (1707bp) protein (569aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8N7_PALPW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81146.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_20_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5968..7695
DNA (1728bp) protein (576aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A7_PALPW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ78493.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source=
scnpilot_p_inoc_scaffold_20_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7692..9455
DNA (1764bp) protein (588aa)
ABC transporter transmembrane region n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0A6_PALPW rbh
ABC transporter
ABC transporter transmembrane region {ECO:0000313|EMBL:ADQ78492.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter
scnpilot_p_inoc_scaffold_20_7
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9550..11079
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003816160 rbh
Uncharacterized protein {ECO:0000313|EMBL:CEN42224.1}; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga cynod
MlrC protein
scnpilot_p_inoc_scaffold_20_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11108..11854)
DNA (747bp) protein (249aa)
Copper homeostasis protein CutC n=1 Tax=Bacteroides faecis CAG:32 RepID=R6US85_9BACE rbh
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragil
putative copper homeostasis protein
scnpilot_p_inoc_scaffold_20_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11901..13544)
DNA (1644bp) protein (548aa)
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T604_PALPW rbh
amp-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADQ80148.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter p
scnpilot_p_inoc_scaffold_20_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13596..14198)
DNA (603bp) protein (201aa)
Transcriptional regulator n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T605_PALPW
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADQ80149.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicig
scnpilot_p_inoc_scaffold_20_11
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14362..17034
DNA (2673bp) protein (891aa)
aceE; Pyruvate dehydrogenase E1 component; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=CG_Paludi_01
Pyruvate dehydrogenase E1 component n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANX4_IGNAJ rbh
aceE; pyruvate dehydrogenase E1 component
scnpilot_p_inoc_scaffold_20_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17097..18494
DNA (1398bp) protein (466aa)
aceF; Pyruvate dehydrogenase E2 component; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=CG_Paludi_01
Pyruvate dehydrogenase E2 component n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANX5_IGNAJ rbh
aceF; pyruvate dehydrogenase E2 component
scnpilot_p_inoc_scaffold_20_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18604..20007
DNA (1404bp) protein (468aa)
pdhD; Pyruvate dehydrogenase E3 component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=CG_Paludi_01
ial:IALB_2982 pdhD; Pyruvate dehydrogenase E3 component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=718171 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
pdhD; pyruvate dehydrogenase E3 component
scnpilot_p_inoc_scaffold_20_14
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20011..20502)
DNA (492bp) protein (164aa)
DNA-o6-methylguanine--protein-cysteine s-methyltransferase (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine me
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W595_9FLAO
methylated-DNA-protein-cysteine methyltransferase
scnpilot_p_inoc_scaffold_20_15
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

comp(20518..21255)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI00037D8A0D rbh
Uncharacterized protein {ECO:0000313|EMBL:KKQ11432.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
putative DNA alkylation repair enzyme
scnpilot_p_inoc_scaffold_20_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21365..21718
DNA (354bp) protein (118aa)
TonB-dependent receptor {ECO:0000313|EMBL:ADQ79688.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_20_17
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21853..26682
DNA (4830bp) protein (1610aa)
Solute carrier family 12 (Potassium/chloride transporters), member 7, putative id=4249610 bin=GWF2_Bacteroidetes_40_14 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
Na-K-Cl cotransporter Tax=GWF2_Bacteroidetes_40_14_curated
Na-K-Cl cotransporter
scnpilot_p_inoc_scaffold_20_18
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26679..27383
DNA (705bp) protein (235aa)
Small-conductance mechanosensitive channel id=4249611 bin=GWF2_Bacteroidetes_40_14 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Small-conductance mechanosensitive channel Tax=GWF2_Bacteroidetes_40_14_curated
scnpilot_p_inoc_scaffold_20_19
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27378..28952)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G0G4_ECHVK rbh
Uncharacterized protein {ECO:0000313|EMBL:KDN56107.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
hypothetical protein
scnpilot_p_inoc_scaffold_20_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29062..30180)
DNA (1119bp) protein (373aa)
Chromate transporter, chromate ion transporter (CHR) family id=3163486 bin=GWA2_Bacteroidetes_42_15 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
chromate transporter; K07240 chromate transporter Tax=GWE2_Bacteroidetes_42_39_curated
chromate transporter
scnpilot_p_inoc_scaffold_20_21
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30260..31090)
DNA (831bp) protein (277aa)
Helix-turn-helix domain-containing protein id=4249604 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
helix-turn-helix domain-containing protein Tax=GWF2_Bacteroidetes_40_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_20_22
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(31095..32105)
DNA (1011bp) protein (337aa)
Arsenical-resistance protein id=4121549 bin=GWF2_Bacteroidetes_41_31 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes rbh
arsenical-resistance protein
Tax=BJP_IG2103_Bacteroidetes_37_22
scnpilot_p_inoc_scaffold_20_23
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32119..32916)
DNA (798bp) protein (266aa)
arsenite S-adenosylmethyltransferase id=4211716 bin=GWF2_Bacteroidetes_40_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWF2_Bacteroidetes_40_14_curated
hypothetical protein
scnpilot_p_inoc_scaffold_20_24
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32921..33346)
DNA (426bp) protein (142aa)
proteiN-tyrosine phosphatase, low molecular weight (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1] Tax=GWB2_Bacteroidetes_41_8_curated
protein-tyrosine phosphatase, low molecular weight (EC:1.20.4.1)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5F1_PALPW
scnpilot_p_inoc_scaffold_20_25
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33440..34762)
DNA (1323bp) protein (441aa)
hypothetical protein AnHS1_03756 id=4133003 bin=GWF2_Bacteroidetes_39_10 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes rbh
permease Tax=GWE2_Bacteroidetes_39_28_curated
permease
scnpilot_p_inoc_scaffold_20_26
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34769..35482)
DNA (714bp) protein (238aa)
Cytochrome c biogenesis protein transmembrane region id=4582219 bin=GWF2_Bacteroidetes_35_48 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
cytochrome c biogenesis protein transmembrane region Tax=GWF2_Bacteroidetes_35_48_curated
cytochrome c biogenesis protein
scnpilot_p_inoc_scaffold_20_27
Porphyromonas gulae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35485..35892)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X0M7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN85347.1}; TaxID=111105 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gulae.;"
scnpilot_p_inoc_scaffold_20_28
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35934..36173)
DNA (240bp) protein (80aa)
Redox-active disulfide protein 2 n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SDC5_9FLAO
Redox-active disulfide protein 2 {ECO:0000313|EMBL:ESU24596.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
thiol-disulfide isomerase and thioredoxin
scnpilot_p_inoc_scaffold_20_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36184..36516)
DNA (333bp) protein (111aa)
Regulatory protein ArsR n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E1_PALPW
regulatory protein arsr
Regulatory protein ArsR {ECO:0000313|EMBL:ADQ79935.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_20_30
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36660..41303)
DNA (4644bp) protein (1548aa)
Autotransporter-associated beta strand repeat protein n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D4S2_PREDD rbh
autotransporter-associated beta strand repeat protein
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:AGB28972.1}; Cellulosome enzyme, dockerin type I {ECO:0000313|EMBL:EGQ13582.1}; TaxID=908937 species="Bacteria; Bacteroidetes; B
Displaying items 1-30 of 350 in total

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