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scnpilot_p_inoc_scaffold_20

Search features with annotation key words

Displaying items 211-240 of 350 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_20_211
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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288312..289748
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UUZ8_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EIY86458.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T
polysaccharide biosynthesis protein
scnpilot_p_inoc_scaffold_20_212
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

289754..291184
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AGH6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86457.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T
scnpilot_p_inoc_scaffold_20_213
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

291181..292353
DNA (1173bp) protein (391aa)
hypothetical protein BfaeM_13742 id=2005876 bin=GWE2_Firmicute_51_13 species=Bacteroides faecis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWF2_Firmicutes_51_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_20_214
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

292350..293540
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CG74_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ92594.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C
Glycosyl transferase group 1 family protein
scnpilot_p_inoc_scaffold_20_215
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

293548..294717
DNA (1170bp) protein (390aa)
Glycosyl transferase group 1 {ECO:0000313|EMBL:CEN21861.1}; EC=2.4.1.57 {ECO:0000313|EMBL:CEN21861.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pept
Uncharacterized protein n=2 Tax=Bacteroides RepID=K1GCE3_BACFG
putative glycosyltransferase
scnpilot_p_inoc_scaffold_20_216
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

294744..295889
DNA (1146bp) protein (382aa)
Putitive LPS biosynthesis protein id=4226018 bin=GWA2_Flavobacterium_35_26 species=Vibrio vulnificus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds rbh
LPS biosynthesis protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_20_217
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

295886..296500
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Pseudomonas alcaliphila RepID=UPI0003041291
imidazole glycerol phosphate synthase subunit HisH
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_20_218
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

296504..297283
DNA (780bp) protein (260aa)
Histidine biosynthesis family protein id=3650415 bin=GWF2_Bacteroidetes_33_16 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
histidine biosynthesis family protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_20_219
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

297347..298360
DNA (1014bp) protein (338aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ADQ79109.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ADQ79109.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludib
UDP-glucose 4-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T315_PALPW rbh
scnpilot_p_inoc_scaffold_20_220
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

298357..299475
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X244_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK05860.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
nad-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_20_221
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

299490..300680
DNA (1191bp) protein (397aa)
udp-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14] Tax=GWF2_Bacteroidetes_43_11_curated
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase id=2080297 bin=GWE2_Bacteroidetes_42_24 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes rbh
scnpilot_p_inoc_scaffold_20_222
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

300673..301914
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HSX3_BACUN rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS06979.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;
glycosyl transferase family 1
scnpilot_p_inoc_scaffold_20_223
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

301928..302890
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CRH2_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKJ92411.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C
NAD-dependent epimerase/dehydratase
scnpilot_p_inoc_scaffold_20_224
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

302887..303843
DNA (957bp) protein (319aa)
Glycosyltransferase, group 4 family n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PN89_9BACE rbh
Glycosyltransferase, group 4 family {ECO:0000313|EMBL:EGF59628.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus
glycosyl transferase, family 4, conserved region
scnpilot_p_inoc_scaffold_20_225
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

303847..304245
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6KY85_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN87446.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae
scnpilot_p_inoc_scaffold_20_226
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(304242..307118)
DNA (2877bp) protein (959aa)
M6 family metalloprotease domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Z9_PALPW rbh
m6 family metalloprotease domain-containing protein
M6 family metalloprotease domain protein {ECO:0000313|EMBL:ADQ79093.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;
scnpilot_p_inoc_scaffold_20_227
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(307197..308282)
DNA (1086bp) protein (362aa)
glycosyl transferase group 1 Tax=CG_Paludi_01
Glycosyl transferase group 1 id=3804274 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
a-glycosyltransferase
scnpilot_p_inoc_scaffold_20_228
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(308272..309582)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3P3_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_20_229
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(309589..312450)
DNA (2862bp) protein (954aa)
Excinuclease ABC subunit A n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T450_PALPW rbh
excinuclease ABC subunit a
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicig
scnpilot_p_inoc_scaffold_20_230
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


312675..313253
DNA (579bp) protein (193aa)
50S ribosomal protein L25 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S5_PALPW
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=694427 sp
scnpilot_p_inoc_scaffold_20_231
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

313265..313828
DNA (564bp) protein (188aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S4_PALPW rbh
scnpilot_p_inoc_scaffold_20_232
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

313828..314247
DNA (420bp) protein (140aa)
Heat shock protein Hsp15 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S3_PALPW
heat shock protein hsp15
Heat shock protein Hsp15 {ECO:0000313|EMBL:ADQ79367.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludi
scnpilot_p_inoc_scaffold_20_233
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

314251..314796
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79366.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_20_234
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

314836..315711
DNA (876bp) protein (292aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porp
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S1_PALPW rbh
scnpilot_p_inoc_scaffold_20_235
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

315718..316263
DNA (546bp) protein (182aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ADQ79364.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ADQ79364.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonad
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S0_PALPW
scnpilot_p_inoc_scaffold_20_236
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

316271..317134
DNA (864bp) protein (288aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ADQ79363.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ADQ79363.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadace
dTDP-4-dehydrorhamnose reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3R9_PALPW rbh
scnpilot_p_inoc_scaffold_20_237
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317186..317419)
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
scnpilot_p_inoc_scaffold_20_238
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(317427..318959)
DNA (1533bp) protein (511aa)
FkbH like protein n=7 Tax=Clostridium thermocellum RepID=A3DHJ9_CLOTH rbh
FkbH like protein
FkbH like protein {ECO:0000313|EMBL:ABN53428.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain A
scnpilot_p_inoc_scaffold_20_239
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(318999..320084)
DNA (1086bp) protein (362aa)
GNAT family acetyltransferase id=2210922 bin=GWB2_Ignavibacteria_35_12 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
GNAT family acetyltransferase Tax=GWA2_Bacteroidetes_31_9_curated
GNAT family acetyltransferase
scnpilot_p_inoc_scaffold_20_240
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(320075..321079)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002E6F035
polysaccharide deacetylase Tax=GWA2_Bacteroidetes_31_9_curated
regulatory protein
Displaying items 211-240 of 350 in total

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