ggKbase home page

scnpilot_p_inoc_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 334 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_29_1
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48..1370)
DNA (1323bp) protein (441aa)
RNA-directed DNA polymerase id=4319290 bin=GWF2_Bacteroidetes_42_66 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 rbh
RNA-directed DNA polymerase Tax=GWE2_Bacteroidetes_42_39_curated
RNA-directed DNA polymerase
scnpilot_p_inoc_scaffold_29_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2116..3774)
DNA (1659bp) protein (553aa)
DNA repair protein RecN n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y3_PALPW rbh
DNA replication and repair protein recn
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromon
scnpilot_p_inoc_scaffold_29_3
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3779..4669)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y4_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_29_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4675..5871)
DNA (1197bp) protein (399aa)
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y5_PALPW rbh
scnpilot_p_inoc_scaffold_29_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6037..6366)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y6_PALPW
hypothetical protein
hypothetical protein Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_29_6
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6381..7181)
DNA (801bp) protein (267aa)
Outer membrane assembly lipoprotein YfiO n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y7_PALPW rbh
outer membrane assembly lipoprotein yfio; K05807 putative lipoprotein Tax=CG_Paludi_01
outer membrane assembly lipoprotein yfio
scnpilot_p_inoc_scaffold_29_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7238..8254)
DNA (1017bp) protein (339aa)
ApbE family lipoprotein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y8_PALPW rbh
apbe family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:ADQ79082.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_29_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8261..9595)
DNA (1335bp) protein (445aa)
Amidohydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Y9_PALPW rbh
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ADQ79083.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strai
scnpilot_p_inoc_scaffold_29_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9600..10334)
DNA (735bp) protein (245aa)
Glycosyl transferase family 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Z0_PALPW rbh
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADQ79084.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propion
scnpilot_p_inoc_scaffold_29_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10354..11160)
DNA (807bp) protein (269aa)
Metallo-beta-lactamase superfamily hydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2Z1_PALPW rbh
metallO-beta-lactamase superfamily hydrolase
Metallo-beta-lactamase superfamily hydrolase {ECO:0000313|EMBL:ADQ79085.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Palud
scnpilot_p_inoc_scaffold_29_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11261..11935
DNA (675bp) protein (225aa)
Peptidase M22 glycoprotease n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E0_PALPW
peptidase m22 glycoprotease
Peptidase M22 glycoprotease {ECO:0000313|EMBL:ADQ78534.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionic
scnpilot_p_inoc_scaffold_29_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11978..13381)
DNA (1404bp) protein (468aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1D9_PALPW rbh
RNA-metabolising metallO-beta-lactamase
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:ADQ78533.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibact
scnpilot_p_inoc_scaffold_29_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13436..14764)
DNA (1329bp) protein (443aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T071_PALPW rbh
dead/deah box helicase domain-containing protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ADQ78261.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter
scnpilot_p_inoc_scaffold_29_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14921..17773
DNA (2853bp) protein (951aa)
glycine dehydrogenase aubunit alpha and beta (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
Glycine dehydrogenase (decarboxylating) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T069_PALPW rbh
scnpilot_p_inoc_scaffold_29_15
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17877..18116
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9SSN0_9BACE
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_29_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18134..18742
DNA (609bp) protein (203aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0E8_PALPW
outer membrane chaperone skp (omph)
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:ADQ78307.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" sou
scnpilot_p_inoc_scaffold_29_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18801..19673)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378F980 rbh
Xylose isomerase-like TIM barrel. Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
scnpilot_p_inoc_scaffold_29_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19718..20473)
DNA (756bp) protein (252aa)
hypothetical protein AnHS1_02619 id=2117854 bin=GWD2_Bacteroidales_45_23 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes rbh
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
scnpilot_p_inoc_scaffold_29_19
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20500..21969)
DNA (1470bp) protein (490aa)
oxidoreductase n=1 Tax=Alistipes senegalensis RepID=UPI00036662FB rbh
Uncharacterized protein {ECO:0000313|EMBL:EGJ99362.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
Predicted dehydrogenases and related proteins
scnpilot_p_inoc_scaffold_29_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22004..23608)
DNA (1605bp) protein (535aa)
Putative uncharacterized protein id=3052315 bin=GWC2_Bacteroidetes_46_850 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes rbh
oxidoreductase Tax=GWC2_Bacteroidetes_46_850_curated
hypothetical protein
scnpilot_p_inoc_scaffold_29_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23613..24074)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000377EB6B
hypothetical protein Tax=GWC2_Bacteroidetes_46_850_curated
putative membrane protein
scnpilot_p_inoc_scaffold_29_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24105..24428)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0E7_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78306.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_29_23
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24425..24766)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I707_9BACE
Septum formation initiator {ECO:0000313|EMBL:KJS04555.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
septum formation initiator-related protein
scnpilot_p_inoc_scaffold_29_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24832..25947
DNA (1116bp) protein (372aa)
DNA polymerase III subunit tau (EC:2.7.7.7)
DNA polymerase III, tau subunit {ECO:0000313|EMBL:ADQ78304.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADQ78304.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
DNA polymerase III, tau subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0E5_PALPW rbh
scnpilot_p_inoc_scaffold_29_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26192..26572
DNA (381bp) protein (127aa)
DNA polymerase III subunit tau (EC:2.7.7.7)
DNA polymerase III, tau subunit {ECO:0000313|EMBL:ADQ78304.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADQ78304.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
DNA polymerase III, tau subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0E5_PALPW
scnpilot_p_inoc_scaffold_29_26
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26716..27702)
DNA (987bp) protein (329aa)
UPF0365 protein PRABACTJOHN_03481 n=3 Tax=Parabacteroides RepID=B7BEK2_9PORP rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_29_27
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27721..28194)
DNA (474bp) protein (158aa)
Putative uncharacterized protein id=4090897 bin=GWF2_Bacteroidetes_33_16 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_29_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28230..29636)
DNA (1407bp) protein (469aa)
WD40-like beta Propeller containing protein id=4090894 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
wd40-like beta propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:ADQ79087.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacte
scnpilot_p_inoc_scaffold_29_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29796..30692
DNA (897bp) protein (299aa)
Cation diffusion facilitator family transporter id=4090891 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good rbh
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ADQ79090.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Pa
scnpilot_p_inoc_scaffold_29_30
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

31174..35682
DNA (4509bp) protein (1503aa)
exported protein of unknown function Tax=GWF2_RIF_IGX_33_9_curated
Spore coat protein CotH id=3495503 bin=GWF2_Ignavibacteria_33_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
hypothetical protein
Displaying items 1-30 of 334 in total

View Taxonomy