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scnpilot_p_inoc_scaffold_29

Search features with annotation key words

Displaying items 241-270 of 334 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_29_241
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(307672..309684)
DNA (2013bp) protein (671aa)
UvrABC system protein B n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2U7_PALPW rbh
excinuclease ABC subunit b; K03702 excinuclease ABC subunit B Tax=CG_Paludi_01
excinuclease ABC subunit b
scnpilot_p_inoc_scaffold_29_242
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(309744..309932)
DNA (189bp) protein (63aa)
PspC domain protein n=8 Tax=Bacteroides RepID=C3Q4U7_9BACE
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
scnpilot_p_inoc_scaffold_29_243
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(310059..312749)
DNA (2691bp) protein (897aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000313|EMBL:ADQ79045.1}; EC=2.4.1.25 {ECO:0000313|EMBL:ADQ79045.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Pal
4-alpha-glucanotransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2V1_PALPW rbh
scnpilot_p_inoc_scaffold_29_244
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

312957..313904
DNA (948bp) protein (316aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ADQ79046.1}; EC=2.7.6.1 {ECO:0000313|EMBL:ADQ79046.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadace
Ribose-phosphate pyrophosphokinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2V2_PALPW rbh
scnpilot_p_inoc_scaffold_29_245
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(314014..314910)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93800.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
2-oxoacid dehydrogenases acyltransferase (catalytic domain)
scnpilot_p_inoc_scaffold_29_246
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(314930..316936)
DNA (2007bp) protein (669aa)
OPT family oligopeptide transporter n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUM6_9PORP rbh
peptide transporter Tax=CG_Paludi_01
peptide transporter
scnpilot_p_inoc_scaffold_29_247
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

317430..318128
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 335 str. F0486 RepID=J0MSD3_9FLAO
hypothetical protein Tax=GWE2_Bacteroidetes_29_8_curated
hypothetical protein
scnpilot_p_inoc_scaffold_29_248
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

318385..319311
DNA (927bp) protein (309aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
PKD domain containing protein id=2017567 bin=GWD2_Bacteroidetes_33_33 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
RSp0476; RHS-related transmembrane protein
scnpilot_p_inoc_scaffold_29_249
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

319649..320215
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=4224411 bin=GWF2_Bacteroidetes_33_38 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
scnpilot_p_inoc_scaffold_29_250
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

320226..321734
DNA (1509bp) protein (503aa)
Band 7 protein id=4224414 bin=GWF2_Bacteroidetes_33_38 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypothetical protein; K07192 flotillin Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
scnpilot_p_inoc_scaffold_29_251
Prevotella sp. CAG:1058, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

321817..323991
DNA (2175bp) protein (725aa)
Fibronectin type III domain protein n=1 Tax=Prevotella sp. CAG:1058 RepID=R5CLJ2_9BACT
Fibronectin type III domain protein {ECO:0000313|EMBL:CCX65642.1}; TaxID=1262918 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" sour
S-layer protein
scnpilot_p_inoc_scaffold_29_252
Porphyromonas uenonis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

324500..325093
DNA (594bp) protein (198aa)
Transcriptional regulator, TetR family n=1 Tax=Porphyromonas asaccharolytica PR426713P-I RepID=E4KRL2_9PORP
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEK17177.1}; TaxID=596327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromo
scnpilot_p_inoc_scaffold_29_253
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

325106..326488
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI0003755A32 rbh
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEE12946.1}; TaxID=879243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas asacc
scnpilot_p_inoc_scaffold_29_254
Porphyromonas asaccharolytica, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

326509..327561
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI000381B0A0 rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEE12945.1}; TaxID=879243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porph
scnpilot_p_inoc_scaffold_29_255
Porphyromonas uenonis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

327576..330719
DNA (3144bp) protein (1048aa)
acriflavin resistance protein n=1 Tax=Porphyromonas levii RepID=UPI00035E1CC9 rbh
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EEK17158.1}; TaxID=596327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromona
acriflavin resistance protein
scnpilot_p_inoc_scaffold_29_256
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(330812..332038)
DNA (1227bp) protein (409aa)
Proteinase inhibitor I4 serpin n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T581_PALPW rbh
proteinase inhibitor i4 serpin
Proteinase inhibitor I4 serpin {ECO:0000313|EMBL:ADQ79875.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="
scnpilot_p_inoc_scaffold_29_257
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

332211..332645
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZTZ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGJ71097.1}; Flags: Precursor;; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
scnpilot_p_inoc_scaffold_29_258
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

332693..334984
DNA (2292bp) protein (764aa)
Iron complex outermembrane recepter protein n=2 Tax=Parabacteroides RepID=N2AUF0_9PORP rbh
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein Tax=GWF2_Bacteroidetes_33_38_curated
TonB-dependent outer membrane receptor
scnpilot_p_inoc_scaffold_29_259
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

335065..336459
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I989_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS09965.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV
glycoside hydrolase
scnpilot_p_inoc_scaffold_29_260
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(336720..338804)
DNA (2085bp) protein (695aa)
Putative uncharacterized protein id=3899480 bin=GWF2_Bacteroidetes_38_335 species=unidentified eubacterium SCB49 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Putative uncharacterized protein Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_p_inoc_scaffold_29_261
unknown

Not on your lists

comp(338905..339033)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_29_262
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(339047..339718)
DNA (672bp) protein (224aa)
manganese/iron superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphy
Superoxide dismutase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T355_PALPW
scnpilot_p_inoc_scaffold_29_263
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

339912..340508
DNA (597bp) protein (199aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T354_PALPW
holliday junction DNA helicase subunit ruva
scnpilot_p_inoc_scaffold_29_264
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

340512..347942
DNA (7431bp) protein (2477aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T353_PALPW rbh
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_29_265
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

348053..350065
DNA (2013bp) protein (671aa)
Putative thiol:disulfide interchange protein DsbD n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7J9J9_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:KEJ85406.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
thiol:disulfide interchange protein
scnpilot_p_inoc_scaffold_29_266
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

350197..350772
DNA (576bp) protein (192aa)
Protein GrpE n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T351_PALPW
grpe protein
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludi
scnpilot_p_inoc_scaffold_29_267
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

350789..351937
DNA (1149bp) protein (383aa)
Chaperone protein DnaJ n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T350_PALPW rbh
chaperone protein dnaj
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;"
scnpilot_p_inoc_scaffold_29_268
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

351998..352888
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XC73_9PORP
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AHF12398.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella visc
scnpilot_p_inoc_scaffold_29_269
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

352893..353183
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FMH0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB10166.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
scnpilot_p_inoc_scaffold_29_270
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

353297..355732
DNA (2436bp) protein (812aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037E9EA5 rbh
Outer membrane protein {ECO:0000313|EMBL:EFI16289.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
hypothetical protein
Displaying items 241-270 of 334 in total

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