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scnpilot_p_inoc_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 191 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_85_1
Prevotella sp. CAG:386, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

208..2937
DNA (2730bp) protein (910aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:386 RepID=R6PIU6_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC24253.1}; TaxID=1262925 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
hypothetical protein
scnpilot_p_inoc_scaffold_85_2
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2930..4612)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BX95_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM81241.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
putative multi-sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_85_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4812..5444
DNA (633bp) protein (211aa)
Carbonic anhydrase id=3951576 bin=GWC2_Bacteroidetes_46_850 species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
carbonic anhydrase Tax=GWC2_Bacteroidetes_46_850_curated
carbonic anhydrase
scnpilot_p_inoc_scaffold_85_4
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5558..7264
DNA (1707bp) protein (569aa)
xylan 1,4-beta-xylosidase (EC:3.2.1.37)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EMP3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU90410.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12
scnpilot_p_inoc_scaffold_85_5
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7462..9957
DNA (2496bp) protein (832aa)
Endonuclease/exonuclease/phosphatase Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_6
unknown

Not on your lists

9983..10150
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_85_7
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10488..12665
DNA (2178bp) protein (726aa)
MAM protein Tax=CG_Paludi_01
scnpilot_p_inoc_scaffold_85_8
unknown

Not on your lists

12682..12846
DNA (165bp) protein (55aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_85_9
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13049..14455
DNA (1407bp) protein (469aa)
Transporter {ECO:0000313|EMBL:KIO44902.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Major facilitator superfamily MFS_1 id=4175698 bin=GWF2_Bacteroidetes_40_14 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
hypothetical protein
scnpilot_p_inoc_scaffold_85_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14474..14749
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3H0_PALPW
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_85_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14770..15669
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3H1_PALPW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79265.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_85_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15656..17923
DNA (2268bp) protein (756aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3H2_PALPW rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ79266.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propi
scnpilot_p_inoc_scaffold_85_13

Not on your lists

17949..18650
DNA (702bp) protein (234aa)
Uncharacterized conserved protein UCP029033, periplasmic protein n=1 Tax=gut metagenome RepID=J9FTU4_9ZZZZ rbh
Uncharacterized conserved protein UCP029033, periplasmic protein {ECO:0000313|EMBL:EJW97938.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagen
hypothetical protein
scnpilot_p_inoc_scaffold_85_14
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18653..19210)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R5J7_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV33271.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenwe
scnpilot_p_inoc_scaffold_85_15
Candidatus Cloacimonas acidaminovorans, Candidatus Cloacimonas, Cloacimonetes, Bacteria

Not on your lists

comp(19254..19799)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VHZ7_CLOAI
Uncharacterized protein {ECO:0000313|EMBL:CAO80968.1}; TaxID=459349 species="Bacteria; Cloacimonetes; Candidatus Cloacimonas.;" source="Cloacamonas acidaminovorans (strain Evry).;"
hypothetical protein
scnpilot_p_inoc_scaffold_85_16
Entamoeba dispar, Entamoeba, Eukaryota

Not on your lists

19989..23114
DNA (3126bp) protein (1042aa)
Putative uncharacterized protein n=1 Tax=Entamoeba dispar (strain ATCC PRA-260 / SAW760) RepID=B0EUQ7_ENTDS
Putative uncharacterized protein {ECO:0000313|EMBL:EDR21739.1}; TaxID=370354 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba dispar (strain ATCC PRA-260 / SAW7
hypothetical protein
scnpilot_p_inoc_scaffold_85_17
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23157..24260)
DNA (1104bp) protein (368aa)
a/g-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Bacteroides sp. CAG:598 RepID=R5BZE3_9BACE rbh
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CCX60985.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source
scnpilot_p_inoc_scaffold_85_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24288..28658)
DNA (4371bp) protein (1457aa)
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:ADQ78671.1}; EC=6.3.4.16 {ECO:0000313|EMBL:ADQ78671.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyr
carbamoyl-phosphate synthase large subunit (EC:6.3.4.16)
Carbamoyl-phosphate synthase large subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1S7_PALPW rbh
scnpilot_p_inoc_scaffold_85_19
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28956..32057)
DNA (3102bp) protein (1034aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; B
Beta-galactosidase n=2 Tax=Parabacteroides RepID=N2ARK4_9PORP rbh
putative exported beta-galactosidase
scnpilot_p_inoc_scaffold_85_20
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32091..33668)
DNA (1578bp) protein (526aa)
Peptide chain release factor 3 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1S9_PALPW rbh
bacterial peptide chain release factor 3 (brf-3); K02837 peptide chain release factor 3 Tax=CG_Paludi_01
peptide chain release factor 3 (brf-3)
scnpilot_p_inoc_scaffold_85_21
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33742..34611)
DNA (870bp) protein (290aa)
lipoic acid synthetase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=CG_Paludi_01
lipoic acid synthetase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1J3_PALPW rbh
scnpilot_p_inoc_scaffold_85_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34783..35607
DNA (825bp) protein (275aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Bacteroides RepID=I9PZ52_9BACE rbh
scnpilot_p_inoc_scaffold_85_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35676..37226
DNA (1551bp) protein (517aa)
primary replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase {ECO:0000313|EMBL:ADQ78977.1}; EC=3.6.1.- {ECO:0000313|EMBL:ADQ78977.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae
Primary replicative DNA helicase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2N3_PALPW rbh
scnpilot_p_inoc_scaffold_85_24
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37233..38462)
DNA (1230bp) protein (410aa)
NupG protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SFV9_9FLAO
Nucleoside permease {ECO:0000313|EMBL:KGO89864.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheo
nucleoside permease
scnpilot_p_inoc_scaffold_85_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38690..40723
DNA (2034bp) protein (678aa)
Transcription termination factor Rho n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1F0_PALPW rbh
transcription termination factor rho; K03628 transcription termination factor Rho Tax=CG_Paludi_01
transcription termination factor rho
scnpilot_p_inoc_scaffold_85_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40763..41509
DNA (747bp) protein (249aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ADQ78541.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ADQ78541.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Ba
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1E7_PALPW rbh
scnpilot_p_inoc_scaffold_85_27
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41623..43773)
DNA (2151bp) protein (717aa)
ATP-dependent chaperone ClpB n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T073_PALPW
ATP-dependent chaperone clpb; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=CG_Paludi_01
ATP-dependent chaperone clpb
scnpilot_p_inoc_scaffold_85_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43998..45917
DNA (1920bp) protein (640aa)
heterodimeric methylmalonyl-CoA mutase small subunit (EC:5.4.99.2)
Heterodimeric methylmalonyl-CoA mutase small subunit {ECO:0000313|EMBL:ADQ79179.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ADQ79179.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacter
Heterodimeric methylmalonyl-CoA mutase small subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T385_PALPW rbh
scnpilot_p_inoc_scaffold_85_29
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45934..48060
DNA (2127bp) protein (709aa)
Heterodimeric methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:ADQ79180.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ADQ79180.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidale
heterodimeric methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Heterodimeric methylmalonyl-CoA mutase large subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T386_PALPW rbh
scnpilot_p_inoc_scaffold_85_30
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48436..50196)
DNA (1761bp) protein (587aa)
abnA; arabinan endo-1,5-alpha-L-arabinosidase (EC:3.2.1.99)
Beta-xylosidase n=1 Tax=Flavobacterium sp. CF136 RepID=J2SCG4_9FLAO rbh
Beta-xylosidase {ECO:0000313|EMBL:GAO29065.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Displaying items 1-30 of 191 in total

View Taxonomy