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scnpilot_p_inoc_scaffold_276

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_276_1
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1597)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NW69_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ01616.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Para
hypothetical protein
scnpilot_p_inoc_scaffold_276_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1752..3464)
DNA (1713bp) protein (571aa)
exonuclease recj (EC:3.1.-.-)
Exonuclease RecJ {ECO:0000313|EMBL:ADQ80485.1}; EC=3.1.-.- {ECO:0000313|EMBL:ADQ80485.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;
Exonuclease RecJ n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6Z1_PALPW rbh
scnpilot_p_inoc_scaffold_276_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3576..4979
DNA (1404bp) protein (468aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6Y9_PALPW rbh
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ADQ80483.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphy
scnpilot_p_inoc_scaffold_276_4
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4985..6763
DNA (1779bp) protein (593aa)
Cl-channel voltage-gated family protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6Y8_PALPW rbh
cL-channel voltage-gated family protein; K03281 chloride channel protein, CIC family Tax=CG_Paludi_01
cL-channel voltage-gated family protein
scnpilot_p_inoc_scaffold_276_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6777..6977
DNA (201bp) protein (67aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyrom
Exonuclease VII small subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6Y7_PALPW
exonuclease vii small subunit
scnpilot_p_inoc_scaffold_276_6
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7210..10296
DNA (3087bp) protein (1029aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003644724 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJF09696.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
TonB-dependent receptor
scnpilot_p_inoc_scaffold_276_7
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10325..11944
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037FFBC1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD03401.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_p_inoc_scaffold_276_8
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12211..15369
DNA (3159bp) protein (1053aa)
NB-Dependent Receptor Plug n=1 Tax=Bacteroidales bacterium CF RepID=U5Q6G0_9BACT rbh
hypothetical protein rbh
NB-Dependent Receptor Plug {ECO:0000313|EMBL:AGY54177.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_276_9
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15396..17048
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q6V3_9BACT rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGY54178.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_276_10
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17070..17897
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5QA46_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY54179.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_276_11
unknown

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comp(19460..19990)
DNA (531bp) protein (177aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_276_12
unknown

Not on your lists

20146..20247
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_276_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20276..21907)
DNA (1632bp) protein (544aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5M4_PALPW rbh
hydro-lyase, fe-s type, tartrate/fumarate subfamily subunit beta
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:ADQ80018.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludiba
scnpilot_p_inoc_scaffold_276_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22183..23709
DNA (1527bp) protein (509aa)
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T591_PALPW rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
scnpilot_p_inoc_scaffold_276_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23833..26571
DNA (2739bp) protein (913aa)
Methionine synthase (B12-dependent) {ECO:0000313|EMBL:ADQ79886.1}; EC=2.1.1.13 {ECO:0000313|EMBL:ADQ79886.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroida
methionine synthase (b12-dependent) (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T592_PALPW rbh
scnpilot_p_inoc_scaffold_276_16
unknown

Not on your lists

comp(26589..26759)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_276_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26955..28073
DNA (1119bp) protein (373aa)
Glycosyl transferase group 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T588_PALPW rbh
group 1 glycosyl transferase Tax=CG_Paludi_01
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_276_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28095..30866
DNA (2772bp) protein (924aa)
DNA mismatch repair protein MutS n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T587_PALPW rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludi
DNA mismatch repair protein muts
scnpilot_p_inoc_scaffold_276_19
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30948..32027)
DNA (1080bp) protein (360aa)
L-alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=CG_Paludi_01
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Q7_PALPW rbh
scnpilot_p_inoc_scaffold_276_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32287..33360
DNA (1074bp) protein (358aa)
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine
Phosphoserine aminotransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T586_PALPW rbh
scnpilot_p_inoc_scaffold_276_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33421..34338
DNA (918bp) protein (306aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ADQ79879.1}; EC=1.1.1.95 {ECO:0000313|EMBL:ADQ79879.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadac
D-3-phosphoglycerate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T585_PALPW rbh
scnpilot_p_inoc_scaffold_276_22
unknown

Not on your lists

comp(34468..34641)
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_276_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34677..37649
DNA (2973bp) protein (991aa)
Protein translocase subunit secF;protein translocase subunit secD n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Y5_PALPW rbh
protein translocase subunit secf;protein translocase subunit secd; K12257 SecD/SecF fusion protein Tax=CG_Paludi_01
protein translocase subunit secf;protein translocase subunit secd
scnpilot_p_inoc_scaffold_276_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37723..38337)
DNA (615bp) protein (205aa)
uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|
Uridine kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3Q1_PALPW rbh
scnpilot_p_inoc_scaffold_276_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38451..41309
DNA (2859bp) protein (953aa)
Two component regulator three Y domain-containing protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Y6_PALPW rbh
Two component regulator three Y domain-containing protein {ECO:0000313|EMBL:ADQ80130.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadacea
two component regulator three y domain-containing protein
scnpilot_p_inoc_scaffold_276_26
Aminobacter sp. Gsoil204, Aminobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41524..43749
DNA (2226bp) protein (742aa)
Glycoside hydrolase {ECO:0000313|EMBL:AGA60127.1}; EC=3.2.1.- {ECO:0000313|EMBL:AGA60127.1};; TaxID=1271879 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Ami
bglX; Periplasmic beta-glucosidase (EC:3.2.1.21)
Glycoside hydrolase n=1 Tax=Aminobacter sp. Gsoil204 RepID=L0EKQ1_9RHIZ rbh
scnpilot_p_inoc_scaffold_276_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43777..45345
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Z3_PALPW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80137.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_276_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45422..48454
DNA (3033bp) protein (1011aa)
Outer membrane receptor proteins, mostly Fe transport n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CYV0_9BACE rbh
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS20050.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="
Outer membrane receptor proteins, mostly Fe transport
scnpilot_p_inoc_scaffold_276_29
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48488..49951
DNA (1464bp) protein (488aa)
Uncharacterized protein n=2 Tax=Bacteroides finegoldii RepID=K5CNB7_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKJ90835.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C
SusD family.
scnpilot_p_inoc_scaffold_276_30
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49966..51597
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Bacteroides finegoldii CL09T03C10 RepID=K5CCH5_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKJ90834.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C
hypothetical protein
Displaying items 1-30 of 70 in total

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