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scnpilot_p_inoc_scaffold_309

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_309_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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162..2222
DNA (2061bp) protein (687aa)
DNA ligase, nad-dependent (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=694427 species="Bacteria
DNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B7_PALPW rbh
scnpilot_p_inoc_scaffold_309_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2231..2800
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79210.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_309_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2838..3719
DNA (882bp) protein (294aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B5_PALPW rbh
scnpilot_p_inoc_scaffold_309_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3847..7293
DNA (3447bp) protein (1149aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase L-proline dehydrogenase {ECO:0000313|EMBL:ADQ79150.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ADQ79150.1};; EC=1.5.99.8 {ECO:0000313|EMBL:ADQ79150.1};; TaxID=69442
delta-1-pyrroline-5-carboxylate dehydrogenase/L-proline dehydrogenase (EC:1.5.1.12 1.5.99.8)
Delta-1-pyrroline-5-carboxylate dehydrogenase; L-proline dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T356_PALPW rbh
scnpilot_p_inoc_scaffold_309_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7283..8212
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadac
2-dehydropantoate 2-reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T360_PALPW rbh
scnpilot_p_inoc_scaffold_309_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8245..9915)
DNA (1671bp) protein (557aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0D1_PALPW rbh
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ78290.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propi
scnpilot_p_inoc_scaffold_309_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9971..10396
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T343_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79137.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_309_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10409..10870
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4J6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79640.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_309_9
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10872..11345
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXT7_9PORP
membrane protein
Membrane protein {ECO:0000313|EMBL:AHW61018.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;
scnpilot_p_inoc_scaffold_309_10
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11365..12357
DNA (993bp) protein (331aa)
FucR protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SL87_9BACE
FucR Tax=CG_Paludi_01
fucR; putative GntR-family regulatory protein
scnpilot_p_inoc_scaffold_309_11
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

12451..12816
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUK5_9SPHI
hypothetical protein Tax=CG_Bacteroid_01
hypothetical protein
scnpilot_p_inoc_scaffold_309_12
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12920..13420
DNA (501bp) protein (167aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E9_PALPW
RNA polymerase, sigma-24 subunit, ecf subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADQ79943.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Pa
scnpilot_p_inoc_scaffold_309_13
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13417..13887
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E8_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79942.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_309_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13911..14357
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E7_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79941.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_309_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14362..15264
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E6_PALPW rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79940.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_309_16
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15536..17452
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y4H2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAO28409.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.
scnpilot_p_inoc_scaffold_309_17
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17466..20315
DNA (2850bp) protein (950aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JE57_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY52645.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
scnpilot_p_inoc_scaffold_309_18
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20308..22407
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RT74_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOA59665.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
hypothetical protein
scnpilot_p_inoc_scaffold_309_19
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22457..24655
DNA (2199bp) protein (733aa)
Secreted/surface protein with fasciclin-like repeats n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G459_ECHVK rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO28400.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.
secreted/surface protein with fasciclin-like repeats
scnpilot_p_inoc_scaffold_309_20
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24675..27917
DNA (3243bp) protein (1081aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HMQ4_9BACE rbh
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY68210.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bac
SusC/RagA family TonB-linked outer membrane protein
scnpilot_p_inoc_scaffold_309_21
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27930..29420
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RT65_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOA59655.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
RagB/SusD family protein
scnpilot_p_inoc_scaffold_309_22
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29439..31025
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XRV2_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:EIY53650.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;
secreted/surface protein with fasciclin-like repeats
scnpilot_p_inoc_scaffold_309_23
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31059..32681
DNA (1623bp) protein (541aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R0J1I6_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY52640.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
secreted/surface protein with fasciclin-like repeats
scnpilot_p_inoc_scaffold_309_24
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32700..35837
DNA (3138bp) protein (1046aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0JFT5_9BACE rbh
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY68206.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bac
SusC/RagA family TonB-linked outer membrane protein
scnpilot_p_inoc_scaffold_309_25
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35842..37557
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HMP9_9BACE rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY52638.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
RagB/SusD family protein
scnpilot_p_inoc_scaffold_309_26
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37561..41922
DNA (4362bp) protein (1454aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MX80_9BACE rbh
alpha-L-rhamnosidase
Uncharacterized protein {ECO:0000313|EMBL:CDB98766.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
scnpilot_p_inoc_scaffold_309_27
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41944..43824
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0HKN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY65618.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C
scnpilot_p_inoc_scaffold_309_28
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43997..48652
DNA (4656bp) protein (1552aa)
FG-GAP repeat protein n=2 Tax=Bacteroidetes RepID=F3XYZ9_9FLAO rbh
Predicted rhamnogalacturonan lyase in rhamnose utilization cluster {ECO:0000313|EMBL:GAO29449.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilu
hypothetical protein
scnpilot_p_inoc_scaffold_309_29
Bacteroides finegoldii CAG:203, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48659..51418
DNA (2760bp) protein (920aa)
Sugar binding domain protein glycosyl hydrolase family 2 n=1 Tax=Bacteroides finegoldii CAG:203 RepID=R6RVB9_9BACE rbh
Sugar binding domain protein glycosyl hydrolase family 2 {ECO:0000313|EMBL:CDC51635.1}; TaxID=1263045 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environ
hypothetical protein
scnpilot_p_inoc_scaffold_309_30
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51432..52667
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYW1_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK01508.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
glycosyl hydrolase family protein rbh
Displaying items 1-30 of 78 in total

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