ggKbase home page

scnpilot_p_inoc_scaffold_510

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_510_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(261..2666)
DNA (2406bp) protein (802aa)
TonB-dependent receptor plug id=2985231 bin=GWF2_Bacteroidetes_49_14 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
tonb-dependent receptor plug
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_510_2
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2685..3599)
DNA (915bp) protein (305aa)
id=2985243 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
id=2985243 Tax=GWF2_Bacteroidetes_49_14_curated
scnpilot_p_inoc_scaffold_510_3
unknown

Not on your lists

comp(3625..4224)
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_510_4
unknown

Not on your lists

comp(4280..5308)
DNA (1029bp) protein (343aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_510_5
unknown

Not on your lists

comp(5348..5464)
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_510_6
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6429..6836)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E04DD
Pilt protein domain-containing protein {ECO:0000313|EMBL:ESU25215.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Fla
vapC; tRNA(fMet)-specific endonuclease VapC
scnpilot_p_inoc_scaffold_510_7
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6836..7219)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F89AC
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
scnpilot_p_inoc_scaffold_510_8
unknown

Not on your lists

comp(7282..7701)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_510_9
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

7738..8511
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q6C5_9BACT
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
scnpilot_p_inoc_scaffold_510_10
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8597..10531)
DNA (1935bp) protein (645aa)
Hypothetical lipoprotein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FK44_FLAJ1 rbh
hypothetical protein
Hypothetical lipoprotein {ECO:0000313|EMBL:ABQ04425.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source=
scnpilot_p_inoc_scaffold_510_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10644..11660)
DNA (1017bp) protein (339aa)
Putative L-iditol 2-dehydrogenase n=1 Tax=Algoriphagus machipongonensis RepID=A3I2P2_9BACT rbh
sorbitol dehydrogenase
Sorbitol dehydrogenase {ECO:0000313|EMBL:AIB14644.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasil
scnpilot_p_inoc_scaffold_510_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11669..12502)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035EE0C4 rbh
amidohydrolase 2; K07046 Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
hypothetical protein
scnpilot_p_inoc_scaffold_510_13
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(12515..13555)
DNA (1041bp) protein (347aa)
fucO; L-fucose dehydrogenase (EC:1.1.1.122); K00064 D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FUT0_ECHVK rbh
oxidoreductase, aryl-alcohol dehydrogenase like protein
scnpilot_p_inoc_scaffold_510_14
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(13666..14127)
DNA (462bp) protein (154aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Sulfurovum sp. AR RepID=I2K513_9PROT
phosphoribosylaminoimidazole carboxylase catalytic subunit
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_510_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(14139..15347)
DNA (1209bp) protein (403aa)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D7M8_9BACT rbh
phosphoribosylaminoimidazole carboxylase, PurK protein
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_510_16
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15458..16876)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SPS8_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU28636.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium lim
Delta-60 repeat-containing protein
scnpilot_p_inoc_scaffold_510_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16968..17561
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3T3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79377.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_510_18
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(17565..19769)
DNA (2205bp) protein (735aa)
TonB-dependent receptor n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L1F8_HALH1 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KER10162.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
TonB-dependent receptor
scnpilot_p_inoc_scaffold_510_19
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20157..23219
DNA (3063bp) protein (1021aa)
hypothetical protein n=1 Tax=Prevotella paludivivens RepID=UPI00036CE259 rbh
TonB-dependent receptor {ECO:0000313|EMBL:GAK35907.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM
outer membrane protein SusC
scnpilot_p_inoc_scaffold_510_20
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23233..25230
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:604 RepID=R6B4M4_9BACT rbh
Outer membrane protein {ECO:0000313|EMBL:GAK35908.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM
RagB/SusD family protein
scnpilot_p_inoc_scaffold_510_21
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25333..26772
DNA (1440bp) protein (480aa)
Oxidoreductase domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C0Y3_SPHS2 rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ADZ76794.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacteri
scnpilot_p_inoc_scaffold_510_22
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26805..28157
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373356B rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK02047.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA
hypothetical protein
scnpilot_p_inoc_scaffold_510_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28340..30175
DNA (1836bp) protein (612aa)
pyruvate carboxylase (EC:6.4.1.1) rbh
Pyruvate carboxylase {ECO:0000313|EMBL:ADQ79062.1}; EC=6.4.1.1 {ECO:0000313|EMBL:ADQ79062.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibact
Pyruvate carboxylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2W8_PALPW rbh
scnpilot_p_inoc_scaffold_510_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30266..31531)
DNA (1266bp) protein (422aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0N4_PALPW rbh
scnpilot_p_inoc_scaffold_510_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31528..31995)
DNA (468bp) protein (156aa)
Ferric uptake regulator, Fur family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0N5_PALPW
ferric uptake regulator, fur family; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=CG_Paludi_01
ferric uptake regulator, fur family
scnpilot_p_inoc_scaffold_510_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32031..32735)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0N6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ81100.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigen
scnpilot_p_inoc_scaffold_510_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33127..34437
DNA (1311bp) protein (437aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.
Aspartokinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0N8_PALPW rbh
scnpilot_p_inoc_scaffold_510_28
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34453..35613
DNA (1161bp) protein (387aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0N9_PALPW rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
scnpilot_p_inoc_scaffold_510_29
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36010..36720)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Prevotella salivae F0493 RepID=U2ML17_9BACT
transcriptional regulator Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_510_30
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36865..37620)
DNA (756bp) protein (252aa)
succinate dehydrogenase subunit b (EC:1.3.5.1)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X080_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK03775.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22
Displaying items 1-30 of 62 in total

View Taxonomy