ggKbase home page

scnpilot_p_inoc_scaffold_29_38

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(51757..53646)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3QHT6_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 528.0
  • Bit_score: 550
  • Evalue 2.10e-153
  • rbh
Pectate lyase {ECO:0000313|EMBL:GAO29320.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 634.0
  • Bit_score: 648
  • Evalue 7.90e-183
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 528.0
  • Bit_score: 549
  • Evalue 1.00e-153

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1890
TTGCATTCAGAAAACGAGTCGGAAAAATCCATGAAAAAAACATTTTTTTTACTGCTGGCACTAAGTGCATCGATAACTCTATGGTCGCAACTTCCCGCATTTCCCGGAGCCGAAGGGCACGGCCGGTTTACGACCGGTGGCCGGGGAGGTACGGTATATTTTGTGACCAATCTGGGCGACAGTAATACCGGAAATGCAGCAACCCGCGAAGGTTCGTTGCGCTGGTGTCTTTCGCAAACGGGTGCGCGCACCATTCTATTCCGGGTAGCGGGTACGATCTGGCTCAACTCTCCTCTTTCCATTTCCAGAGGCGATGTAACCATTGCCGGGCAATCGGCTCCCGGCGACGGAGTGGCGGTGGCCGGTCAACCTGTAACCATCAGCGCCAATAACGTTATTATCCGCTACTTACGTTTTCGCATGGGGCAGGAGCGTGTTACCAGCGCCGATGGTGCCGATGTGATGGGTAGCCGGCGTTATAAGAATATTATCATCGATCATTGTTCGTTCAGCTGGAGTACCGACGAATGTGTATCGTTGTATGAAGGAGAAAATATTACCCTGCAATGGAGTATCATCGCCGAAAGCCTCCGGCTGGCCAAGCATTCGAAAGGGCCGCACGGGTACGGTGGCATCTGGGGCGGGAAAAACGCAAGCTTTCATCACAACCTGATGGCTCACAACGATAGCCGCACTCCGAGATTCGGGCCGGGCTCCACCACGCAGGGACAGGAATATGTCGATATGCGGAATTGTGTAATCTACAACTGGGCCGGGGTGGGTTGCTATGGTGCCGAAGCCATGAATGTTAATATTGTAAACAATTATTATAAGCCGGGTCCGGCCACTGCATCGGGTACCAATCGTGCCCGCATTATTGCGATCGATAAGAAAACCGGTCTGCCGAGTTCCGATTCGTTTTATCCGATCAATAATAAGTTCGGTAAATTTTTTATCGAGGGCAATATCGTGGATGCATCCACCAGTACTTCGACAGCCGATAAGACTATCTGTCTCAACGCCACCCAGCATAACTGGAATTATGGTGTGTATAACCAGATCAATTCGGCCTATAATATAACAGCTGCCGAAAAAGCCGCCCTCAAAACAGAGCTTCCTTTTGCAACCGGCGAAGTCACCACTCATCTGGCTTCAACAGCCTACGAAAAAGTGCTGGCCTATGCCGGAGCCAGTCTCCGGCGCGATGCGCACGATGCCCGTATCGTGCATGAAACCCGCACGGGAACAGCTGCGTTCAAAGGATTATCGCCTTACAACGGCAAAGGAACGGTGACCTATCCGGCCGGAACCGTGATTGGCAACGAAACGCTTACTACCGCCACTACCATTAACTGGAAAAGTACATCGTATCCGAAAAACGGAATTATCGATTCCGAAACCGATATTCGTCCGTCCGATGCCCCGTCCGACTGGACTCCCTGGCCGGTGCTGGCCGGTGGCGACCCGGTTACCGACAGCAATGCCGATGGTATCCCCGACGGATGGCTCGAAACCAATTTTCCGGGCAAAACTGCCAACGATACACACGATTCGGGCTATACGTTCATCGAAATGTACCTCAACTCGCTTGTCGAGGATATTACCGCGGAGCAAAACAGGGATGCCATCACCGTGTCGGTCGAATCACCGTTGCCGAATGCTTCGAAGGTGATCGTCCGTCGCATGGAGCAGGAGATCCTGCTGGAGTCGGAACAGCCGATGCAGCAGGTGAGAGTAACCGACCTCACGGGTAGGATGGTGCATTTTCACGAGCCTTTGGCAGTGTTCTATCCCATGCCGCTGAGCCATTTTGCTCAGGGCACTTACCTGCTTCAGGTAGTGCACTCCGGATTTCAGCATCCGTTTGTAACCAAATTTATCAAACAATAA
PROTEIN sequence
Length: 630
LHSENESEKSMKKTFFLLLALSASITLWSQLPAFPGAEGHGRFTTGGRGGTVYFVTNLGDSNTGNAATREGSLRWCLSQTGARTILFRVAGTIWLNSPLSISRGDVTIAGQSAPGDGVAVAGQPVTISANNVIIRYLRFRMGQERVTSADGADVMGSRRYKNIIIDHCSFSWSTDECVSLYEGENITLQWSIIAESLRLAKHSKGPHGYGGIWGGKNASFHHNLMAHNDSRTPRFGPGSTTQGQEYVDMRNCVIYNWAGVGCYGAEAMNVNIVNNYYKPGPATASGTNRARIIAIDKKTGLPSSDSFYPINNKFGKFFIEGNIVDASTSTSTADKTICLNATQHNWNYGVYNQINSAYNITAAEKAALKTELPFATGEVTTHLASTAYEKVLAYAGASLRRDAHDARIVHETRTGTAAFKGLSPYNGKGTVTYPAGTVIGNETLTTATTINWKSTSYPKNGIIDSETDIRPSDAPSDWTPWPVLAGGDPVTDSNADGIPDGWLETNFPGKTANDTHDSGYTFIEMYLNSLVEDITAEQNRDAITVSVESPLPNASKVIVRRMEQEILLESEQPMQQVRVTDLTGRMVHFHEPLAVFYPMPLSHFAQGTYLLQVVHSGFQHPFVTKFIKQ*