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scnpilot_p_inoc_scaffold_20_265

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 353423..354091

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T844_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 37.2
  • Coverage: 223.0
  • Bit_score: 155
  • Evalue 9.00e-35
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 223.0
  • Bit_score: 155
  • Evalue 2.50e-35
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADQ80888.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter. similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 223.0
  • Bit_score: 155
  • Evalue 1.30e-34

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 669
ATGTACAAGGTATTATTAATCGAAGATGATTTAAATTTGGGTACTACACTGAGAGGGGCGCTGGAAGAACGTAAATTTTCGGTACGTTATTTATCAGGGGGCACCAACGTAATGAAGGAGTTTGCTGATTTTCAGCCCGATATTGTTTTGCTTGATGTGAACCTGAACGAGGAGCTCGATGGTTTTGCCATCAGTAGGAAAATACGCGAAGTAAGTCCCGTGCCCTTACTCTTCACCACTTCCCGTGACGAGAATACCGATTTCGATCAAGCCTTCAGCATCCCCAATACCGATTATGTTCGCAAACCCTATCGCCTGGCCGAAGTGTTGAAGCGTATCGAAAAGTTGGTGGTTAAAGAAGCGTCGGCCGAAAAGTTTGATATAGGCCGGTACGAGTTTTATCCTTCACAGCATAAACTGGTTATTCAGGAGGAGGAGATTTATCTTAATAATTATGCTTCGGAAGTACTGAATGTTCTGTGTAAAAATGCCGGAAATTTTGTTAAACGTCCGCTGATGATCGAAACGGTGTGGAAAACCAAGGATATCCGCACGAAAGAAGGGTCGCTCAATAATATTATGAGCATGTTGCGAAAATACTTCGAAAATGAGGAAGGCGTGATTTTAGAAAGTCGTATTAAACTGGGGGTACGGTTAAAAGTGGATTGA
PROTEIN sequence
Length: 223
MYKVLLIEDDLNLGTTLRGALEERKFSVRYLSGGTNVMKEFADFQPDIVLLDVNLNEELDGFAISRKIREVSPVPLLFTTSRDENTDFDQAFSIPNTDYVRKPYRLAEVLKRIEKLVVKEASAEKFDIGRYEFYPSQHKLVIQEEEIYLNNYASEVLNVLCKNAGNFVKRPLMIETVWKTKDIRTKEGSLNNIMSMLRKYFENEEGVILESRIKLGVRLKVD*