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scnpilot_p_inoc_scaffold_20_292

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(409611..412886)

Top 3 Functional Annotations

Value Algorithm Source
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8X4P5_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 999.99
  • Bit_score: 1196
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:GAO30831.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548. similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 999.99
  • Bit_score: 1276
  • Evalue 0.0
TonB-linked outer membrane protein, SusC/RagA family similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 999.99
  • Bit_score: 1133
  • Evalue 0.0

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3276
ATGAATAAACTGGTAAAAACGCTTATTTTCCTGTTCATACTTCTGGCCGGCACATTCAGCATTTCAGCACAGGATGCAGGTTCAAACATCATCCGGGGTATCGTCTCCTCAAAGATTGACGGTCCTCTGATGTCGGTTCACGTTGTCGAGGTAGACCAGAACAAACGTTATATTTCGACGACCGTTACCGATATCAACGGGAACTTTGCACTGAAAGTGAAAAACACATCCAATAAACTCCAGGTTTCATACGTAGGAATGAAAACCCAGCTTTTAACGATCGGAAGCCGCACCTACTTCAATATAGTGCTCGAAGATGCCACCACCATCAGCGAGGTGACCGTACGCGCAAACCGTACGGTGAATACCGGTACCCTTACGATTCCCGAACGCGAACGATCCATGGCGATGCAAACCATTTCGTCCAAGGAATTCGAAGGACTTTCGGTTGCTTCGGTCGACGATGCCCTCCAGGGAAAAATCGCCGGTCTCGATATCATTGCCAATTCGGGCGACGTAGGGAGCGGATCGTCGATGCGTATCCGCGGTATCACTTCCATCAACAACAGCTCCGAACCGCTGATCGTACTCAACGGCGTTATTTACGACACGCCTCAGGCCTCTACTTTCGAATTCGCCACCGCCAACCAGGAGCAATTTGCCGACCTGTTGAGTATCAACGTCGACGATATCGAATCGATTACCGTACTGAAAGACGCCGCTTCAACGGCGATGTGGGGGTCGCGGGGAGCCAACGGGGTTATCTCCATCAATACTAAAAAAGGAATCCGGGGAAAAACCCGTGTTCAATATACCTACCGCTATAGCGGCGCCATACAACCTCAAGGATATACGATGCTCACCGGCGACGATTATACCATGTTGATGAAAGAAGCTTATTTCAATCCCCGCCAGAGCAATACGGCCTCCAATATCCGCGAATTCAACTACGACCCTTCGTTCTCGGAATACGAAAACTACAACAACAATACGAATTGGGTGAAAGCCGTTACTCAGTACGGTCAAACCCACGACCATTACGTTCAGCTCTCGGGAGGCGGCGAAAAGGCCCGTTTTATGATCTCGGGAGGATATCTGAACCAGACGGGATCGGTAATCGGCCAGCAGGTCGAACGTTTCTCGACCCGTATGAACCTCGATTACAATGTGTCGGACCGTATCCGTTTCTCGACCGAGTTCTCGTTTACCCATACCGACAACAATCGCAACTACGACGCCCTGCTGCCGATCGCCTACCGCAAAATGCCCAACCTGAGTATTTATGCCCAGGATGCCGACGGCAACAATACCGACCGGTATTATAAAATACTTACATCGGCCTCCAATCAGCTGGCCGACCAGAAAGACATGCGAAACCCGGTAGCATCGGCCCGTCTGGCCATCAACGAGTACAAATCGACCCGTATCCTGCCTACCTTCCGCCTCCAGTACGACCTGCTCGATCCGCAGGAGCAGATGCTCCGGTACCGGGGATATGTTTCGTTCGACGTTAACAACGGAAACACCTTCACCTTCCTTCCCAAGGAACTGTCGACATCCAACTGGCTTCAGGAGGACATCAACCAGTCGAGCACTGCCGACTCGCGCAGCTTGTCCGTTTCGTCGGATCACAACCTCACCTGGACGCCAAAGTTCACCAACGAAGATCATTCGCTGATGCTTTACAGCTCGTTTCAGTTCGGAACCAGCAATTCGCGCTCGCAGTTTATCAGCTCGTACGGCACACCCAGCGGAACCATCACCGGATCCACGGCCGGAGGATATATAAAGGATTTCTCGACCGGACCGGGCCAGGGACGCTGGATGGCCTACATGATGCTCGGACACTATGCTTATAAATCGAAATACATAGCCGATATTACCGTTCGCCGCGACGGGAGTACCAAGTTTGGCGACAACCGTAAATGGGGAACTTTCCCGGGCGTATCGTTCGCCTGGAACATTATTGACGAAGATTTCATGGAATTCTCGACAAACTGGCTGAGCACCATGCGTTTCCGCCCCAGCTGGGGGATAACCGGCAACCCTCCCAAGTCCGAATACCTCTTCTACAGCCTCTATTCGTCGTTCGGCAATTACATGGACTTACCGGCGATCCGTCCCGAAAACATCCAGCTCACCGACCTGCGCTGGGAAAAAGTTTCGTCGTTCAACTACGGTCTCGACCTGGGATTCTTCGACGACCGTTTTATGATGGACTTCAACTTTTACTACAAACGCACCGACGATATGTTGTGGGGCGGACTTACCATCCCGTCGTCGGCCGGTTATTCGGTATTAAACTACCAGAACGTAGGGTCGATGGACAACCGCGGCTGGGAGCTTAACCTGCAAGGATACAAACTGATAAAGGCCGGCGACTTCTGGATGGATGTCACCCTGAACTTCTCCAATTACGTGAATAAAATCCTGGATATCGACGATGCGATCCTGGCACGCTACAATACGGTCGATTTCAACATCCGGAACGGACAGTACCTGACCCGTTTGCAGGAAAACAACTCCTACGGATCGATCTACGGCTTCCGTTACAAAGGAGTATATCAATACTCGCAGTACGAAGAGGGCCGCCCGGGGACCAGCCCGTTTGCCCGCGATGCCGACGGCCAGGTGATCCGCGATGCGAAAGGCGAACCGGTGCGCATGACCTTCTCGGCAGGCACCAACTCCGAATATAAATTCAAAGGAGGCGATGCCATTTACGAAGATATCAACCACGACGGCAATATCAACGAACTCGACATCGTGTACTTAGGTAACTCGAACCCCCTGATGAACGGCGGTATCAGTTTCAAGTTCAATTACAAAACCCTATCGGTCAACATTTTCTCGAACTTCCGTATCGGCAACGAGGTGGTAAACATGGGCCGGATGTATGCCGAAAACATGTATGGCAACAACAACCAGGCGGCATCGGTTAACTGGAGATGGCGCAAGGACGGCGACCTGACCCATATGCCGCGCGCCCTTCATCAGTCGGGCTACAACTGGCTGGGCAGCGACCGTTTTGTTGAAAACGCTTCTTTCCTCCGCGTTAAAAACATACAGGTAAATTACGGCGTTCCGTCCAAACACCTCAAACCCATGAAAATAAACCAGGCAACCTTGTACCTCACCATCAACAACCTGATGACCTTTACCCGATATTCGGGCGTCGATCCCGAGGTGGGCTACGGAACATTCGGAGTGAGCTACGACGGCAACCAGACACCGCGTTCCAAATCGTTTACTGCCGGTTTATCGGTTGCATTTTAA
PROTEIN sequence
Length: 1092
MNKLVKTLIFLFILLAGTFSISAQDAGSNIIRGIVSSKIDGPLMSVHVVEVDQNKRYISTTVTDINGNFALKVKNTSNKLQVSYVGMKTQLLTIGSRTYFNIVLEDATTISEVTVRANRTVNTGTLTIPERERSMAMQTISSKEFEGLSVASVDDALQGKIAGLDIIANSGDVGSGSSMRIRGITSINNSSEPLIVLNGVIYDTPQASTFEFATANQEQFADLLSINVDDIESITVLKDAASTAMWGSRGANGVISINTKKGIRGKTRVQYTYRYSGAIQPQGYTMLTGDDYTMLMKEAYFNPRQSNTASNIREFNYDPSFSEYENYNNNTNWVKAVTQYGQTHDHYVQLSGGGEKARFMISGGYLNQTGSVIGQQVERFSTRMNLDYNVSDRIRFSTEFSFTHTDNNRNYDALLPIAYRKMPNLSIYAQDADGNNTDRYYKILTSASNQLADQKDMRNPVASARLAINEYKSTRILPTFRLQYDLLDPQEQMLRYRGYVSFDVNNGNTFTFLPKELSTSNWLQEDINQSSTADSRSLSVSSDHNLTWTPKFTNEDHSLMLYSSFQFGTSNSRSQFISSYGTPSGTITGSTAGGYIKDFSTGPGQGRWMAYMMLGHYAYKSKYIADITVRRDGSTKFGDNRKWGTFPGVSFAWNIIDEDFMEFSTNWLSTMRFRPSWGITGNPPKSEYLFYSLYSSFGNYMDLPAIRPENIQLTDLRWEKVSSFNYGLDLGFFDDRFMMDFNFYYKRTDDMLWGGLTIPSSAGYSVLNYQNVGSMDNRGWELNLQGYKLIKAGDFWMDVTLNFSNYVNKILDIDDAILARYNTVDFNIRNGQYLTRLQENNSYGSIYGFRYKGVYQYSQYEEGRPGTSPFARDADGQVIRDAKGEPVRMTFSAGTNSEYKFKGGDAIYEDINHDGNINELDIVYLGNSNPLMNGGISFKFNYKTLSVNIFSNFRIGNEVVNMGRMYAENMYGNNNQAASVNWRWRKDGDLTHMPRALHQSGYNWLGSDRFVENASFLRVKNIQVNYGVPSKHLKPMKINQATLYLTINNLMTFTRYSGVDPEVGYGTFGVSYDGNQTPRSKSFTAGLSVAF*