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scnpilot_p_inoc_scaffold_29_216

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(280550..280849)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3S9_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 99.0
  • Bit_score: 196
  • Evalue 1.20e-47
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 197
  • Evalue 2.00e-48
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter. similarity UNIPROT
DB: UniProtKB
  • Identity: 97.0
  • Coverage: 99.0
  • Bit_score: 197
  • Evalue 9.90e-48

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 300
TTGAGCCTTACCCGGGGGTATTTCGGAGGCCGCCGCAATGTTTGGACCGTTGCTAAAAATACCTGGGAAAAAGGATTGCAGTATGCTTACCGCGATCGTAAAAACAAAAAACGGAACTTCCGCGCTTTATGGATTCAGCGTATTAATGCTGCTGCCCGCCTGGAAGGTATGTCGTATTCGAAATTGATGGGCGCTTTGCATAAAGCCGGAATCGAAATGAACCGTAAGGTATTGGCCGACTTAGCAATGAACCATCCTGAAGCATTTCAGGCTATCGTACAGAAAGCTAAAAACGCATAA
PROTEIN sequence
Length: 100
LSLTRGYFGGRRNVWTVAKNTWEKGLQYAYRDRKNKKRNFRALWIQRINAAARLEGMSYSKLMGALHKAGIEMNRKVLADLAMNHPEAFQAIVQKAKNA*